KEGG   Mycobacterium intracellulare subsp. chimaera: AN480_05845
Entry
AN480_05845       CDS       T04926                                 
Name
(GenBank) endonuclease VIII
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mchi  Mycobacterium intracellulare subsp. chimaera
Pathway
mchi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mchi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AN480_05845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mchi03400]
    AN480_05845
Enzymes [BR:mchi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AN480_05845
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AN480_05845
DNA repair and recombination proteins [BR:mchi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AN480_05845
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zf-TFIIB Ribosomal_S13 NFACT_N
Other DBs
NCBI-ProteinID: AOS91079
UniProt: A0A1Y0T1S2
Position
1198742..1199605
AA seq 287 aa
MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPPISALHGQTVVGADRWGKYLG
LRTDDLYLVAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVSDPQQIPQIASLGPDALDLGPDDLARVLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSEKQLAALHDAMITVLTDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq 864 nt   +upstreamnt  +downstreamnt
gtgcccgaactgcccgagatcgaagcgctggccgatcatctacggcgcaacgccgtgggc
ctgacggtcggccgcgtcgacatcgccgccctgtccgtcctgaagaccttcgacccaccg
atcagcgcgctgcacggccagaccgtggtcggcgccgaccgctggggcaaatacctgggg
ctgcggacggacgacctctacctggtcgcccacctgtcccgggcgggctggttgcggtgg
tccgacaagctggccgcggcgccgctgcgccccggcaagggcccgatcgcgctgcgggtg
cacctgggcacgcccggggaggcgcccggcttcgacctcaccgaggccggcacccagaag
cggctggcggtgtggctggtaagcgacccgcagcagattccgcagatcgcctcactcggg
ccggacgcgctggacctcggccccgacgacctggcccgcgttctggcgggcaacaccggg
cggatcaagaccgtcatcaccgaccagaaggtgatcgccggcatcggcaacgcctacagc
gacgagatcttgcacgttgcgaagatctcgccgttcgccaccgccggcaagctgtccgag
aagcagctcgccgcgctgcacgacgccatgatcaccgtgctcaccgacgcggtgagccgc
tccgtcggccagggcgcggccacgctcaagggtgagaagcgctccggattgcgcgtgcac
gcccgcacgggactgccctgcccggtgtgcggggacaccgtgcgcgaagtgtcattcgcg
gacaagtcttttcagtattgtccgacgtgtcagaccggaggcaaggtcctggccgaccgg
cggatgtcgcgtttgctgaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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