KEGG   Mesomycoplasma conjunctivae: MCJ_005400
Entry
MCJ_005400        CDS       T00919                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
mco  Mesomycoplasma conjunctivae
Pathway
mco03030  DNA replication
mco03430  Mismatch repair
mco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MCJ_005400 (dnaE)
   03430 Mismatch repair
    MCJ_005400 (dnaE)
   03440 Homologous recombination
    MCJ_005400 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mco03032]
    MCJ_005400 (dnaE)
   03400 DNA repair and recombination proteins [BR:mco03400]
    MCJ_005400 (dnaE)
Enzymes [BR:mco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MCJ_005400 (dnaE)
DNA replication proteins [BR:mco03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MCJ_005400 (dnaE)
DNA repair and recombination proteins [BR:mco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MCJ_005400 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DUF655 DUF3791
Other DBs
NCBI-ProteinID: CAT05239
UniProt: C5J6X6
Position
complement(624942..627878)
AA seq 978 aa
MQLINLHTNSEYSFLSSTIKIDSLINYAIQNNLSTLVLTDINNLFAVPKFYHLCKKNNIN
PIIGLQLEAENYHFILLAKNYLGYQHLSALSSKKMHNQEISILELSNENVIIIDHPELGF
YTKNKQQLKLDNYYVVSNDVNLENAVFVQNRSVLYAKEEKYLKYLYKIKGADWVDKKFYD
FQEWSIDVDESIIKRTNELVSNIQIEFPKPFFNLPDVPSFTSSNANDNLKSILEDSVIKK
QDELKNYPQVRKRLSSEYKVISELNFSNYFLLIWDFIKWARSQNILIGPGRGSSSGSLIS
YLLDITQINPLRYDLLFERFLNPLRQTMPDIDIDIQDTRRSEVIDYIQKTYGYEHTATII
TFSTLAARSVFRDVSKAFGISESEVNANAKLIKPNMTLQECYDEEKSAFRSLIDRQEQDK
TYKYKEIFKISKFLEGMPRQSGTHAAGIVVSKVPICQLVPTLESKDGYNQVQFSAEYLEE
FSLLKIDLLGLKNLNIVQQILTLIAKENHELSFEDLPLFDAATNNLLSSGLTSGIFQLES
PGMSSTLRGVGVDSIEDVIATISLFRPGPLKQIPIYKQRKNNKIKWESISYEYDQIVAPT
YGIIIYQEQIMQICQQIAGFNLAQADIIRVAISKKDESKLIAIKDSFIEAAIKKGHKLEY
IEKIYELIYKFADYGFNKAHAAAYATLAYKMAYLKTKFPAQFYSCLISNENGSHENIKKY
ALEAQKSGFKVCQPDINHSFENATFDLEEKLIFLPLTMIKGIGSNYIRPLLKEREAKGKY
SNFIDFFLRMKIINFSETLIIKLIKASALASFGSQDSLLASVEIAKNYYPCILEDAKGEK
YIDYSQVFNIPFVLKEVEIDYQQTIKNEIEFLGMQFSKPPIPKALKNQIKLVDLEANQQY
SLNLVVNNFALLKSKAGSSYAKISLSDFDTQVDVLLFGSKVSLLEQLKKGSIFKFLISKN
LKNEFKIYNNKFEEIEYE
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgcaattaataaatttacatactaatagtgaatattcttttttatcttcgacaataaaa
attgattccttgataaattatgcaattcaaaacaatttatcaacacttgtgttaactgat
attaataatttgtttgctgttcctaagttttatcacctgtgtaagaaaaacaacattaat
cccattattggcttgcaattagaagctgaaaattaccattttattcttttagctaaaaac
tatttaggatatcagcatctttcagctttgagctccaaaaagatgcacaatcaagaaatt
agtattttggaattaagtaatgaaaatgtcattatcattgatcacccagagcttggtttt
tatacaaaaaacaaacaacaattaaaattagataactattatgttgtctcaaatgatgtc
aatcttgaaaatgcggtttttgtccaaaaccgtagtgttttatacgcaaaagaagaaaaa
tatttaaaatatttgtataaaattaaaggcgctgactgagttgataaaaagttttatgat
tttcaagaatgatcaattgatgttgatgaatcaattattaaacgcactaatgagctagtc
tccaatattcaaattgaatttcctaaacctttttttaatcttccagatgtcccaagtttt
acctcaagtaatgcaaatgataatctaaaatctattttagaagacagtgtcatcaaaaag
caagatgaactcaaaaattatccacaagttcgcaaacgtttatcaagtgaatataaagta
attagtgagcttaatttttctaattattttttgctaatttgagattttattaaatgagct
agatcacaaaatattctcataggcccaggtcgtggttcatcttctggttcactgatttct
tatttgctagatattacgcaaatcaatccgttaagatatgatttgctttttgaacgtttt
ttaaatccgctacggcaaactatgccagatattgacattgatattcaagatacacgccgt
tctgaagtcatcgattatattcaaaaaacctatggatatgaacacacagcgacaattatt
accttttcaactttggctgctcgtagtgtttttcgtgatgtatcaaaagcttttggcatt
agtgaatcagaagtaaatgctaatgctaaattaattaagccgaatatgacgcttcaagaa
tgttatgatgaagaaaaatcagcttttcgttcattgatagatcgtcaggaacaagataaa
acctataaatataaagagatttttaaaatttctaaatttttagaaggtatgccaagacaa
tcgggtactcatgctgctggaattgttgtctctaaagttcctatttgtcaattagtgcct
actttagagtctaaagatggctacaatcaagtacaatttagcgctgagtatctagaagag
ttttcacttttaaaaatcgatcttttaggactaaaaaacttaaatattgtacagcaaatt
ctaacattaattgccaaagagaatcatgagcttagctttgaggatttaccactttttgat
gcagctaccaataatttgctctctagcggtttgactagtggaatttttcaacttgaatcg
ccagggatgtcttcaactttacgtggagttggggtagatagcatcgaagatgtgattgca
acaatttcgcttttccgtcctggaccactcaagcaaatacccatttataaacaacgtaag
aataataaaataaagtgggaatctattagttacgagtatgaccaaattgttgctccaact
tatggaattataatttatcaagaacaaattatgcaaatttgtcagcaaattgcgggcttc
aatttggcacaagctgatattattagggttgccatttccaaaaaagatgaatctaaattg
attgcaattaaggactcatttattgaagccgcaataaaaaaaggtcacaaactagaatat
attgaaaaaatttatgaactaatttataaatttgcagattatggctttaacaaagcacat
gctgccgcttatgcaacactggcttataaaatggcctatttaaagacaaagtttccagca
caattttattcttgtttaataagtaatgaaaatggtagtcatgaaaatattaaaaaatat
gctctcgaagctcaaaaatcgggatttaaagtttgtcaacctgatattaatcattctttt
gaaaatgctacctttgatttagaagaaaaactcatttttcttcctttgacaatgattaaa
ggtattggctccaactacatcagaccacttttaaaagaacgtgaagcaaaaggaaaatat
agcaattttatagacttttttctaagaatgaagataattaatttttctgaaacactgatt
attaaattgatcaaagcaagtgcgcttgcgagctttggctcacaagatagcttgctcgca
agtgttgaaattgctaaaaattactacccatgcattcttgaagatgccaaaggcgaaaaa
tatattgactattcacaagtttttaatattccctttgttttaaaagaagttgaaattgat
tatcaacaaactataaaaaatgaaattgaatttcttggtatgcaatttagcaaaccaccg
attcccaaagctcttaaaaatcaaatcaaacttgttgacttagaagctaatcaacaatat
agtttaaatcttgttgttaacaattttgcccttttaaaaagcaaggcaggctcaagttat
gctaaaataagtttaagcgattttgatactcaagttgatgttttgctttttggatcaaag
gtatcattgcttgagcaattaaaaaaaggaagtatttttaaatttttaataagtaaaaat
ttaaaaaacgaatttaaaatttataataacaagtttgaggaaatagaatatgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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