KEGG   Mycoplasmopsis californica ST-6: MCFN_01330
Entry
MCFN_01330        CDS       T03247                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
mcr  Mycoplasmopsis californica ST-6
Brite
KEGG Orthology (KO) [BR:mcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mcr03016]
    MCFN_01330 (truB)
Enzymes [BR:mcr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     MCFN_01330 (truB)
Transfer RNA biogenesis [BR:mcr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MCFN_01330 (truB)
 Prokaryotic type
    MCFN_01330 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 CATSPERB_1st
Other DBs
NCBI-ProteinID: AIA29412
UniProt: A0A059XVY7
Position
296016..296858
AA seq 280 aa
MFYLLHKPKNISSFACIKKFARQMKIKKIGHSGTLDPLASGLLLLATDDDTKLLPYIKDK
TKTYKASIIFGQARSTYDEEGEITQTSENKINESDLNAVLEWFRTQNVQIPPIFSAKKIN
GTRAYDLARRKQEVQLKAQKIKIHEAQFISFNYQSQELVVKLKVSNGTYIRSLAHDIGQA
FNTCSYMSDLERTEISTLNNNLLVNNNFVAIINVLPLLSVASLMLSGDQIKVLQKGLLLP
IETTDGQYVITNQKNGTQVLGIIEVANSFARVVKLFGNRL
NT seq 843 nt   +upstreamnt  +downstreamnt
atgttttatttactacacaaacctaaaaatatttcttcatttgcttgcattaaaaaattt
gctcgtcaaatgaaaattaaaaaaataggccacagcggaacattagatccattggccagt
ggtcttcttctactcgctactgatgatgatacaaaacttttgccatatattaaggataaa
acaaaaacgtataaggctagcatcatttttggacaagctcgctcaacatatgatgaagag
ggagaaattacccagactagcgaaaataaaattaacgaaagcgatttaaacgctgtttta
gagtgatttagaacacaaaatgtccaaataccacctatttttagtgctaaaaaaattaat
ggtactcgtgcatacgatttagctcgccgtaagcaagaagttcaattaaaagctcaaaaa
ataaaaattcatgaagcacaatttatttcatttaactaccaatcccaagaattggtcgtt
aagcttaaagtctcaaatggcacctacattaggtcgctagcacatgatattggtcaagcg
ttcaatacatgctcatacatgagtgatttagaaagaactgaaatttccacattaaacaat
aatctattagtaaacaataattttgttgctataattaatgtcctgcctttactgagtgtt
gcttcattaatgttgagtggcgaccaaataaaagtcttgcaaaaaggacttttattgcca
attgagacaactgatgggcaatacgttatcactaaccaaaaaaacggcactcaggttcta
ggtattattgaggttgcgaatagttttgctcgtgtagttaaattatttggcaatcgatta
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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