KEGG   Moraxella catarrhalis 25240: DR90_471
Entry
DR90_471          CDS       T03217                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mcs  Moraxella catarrhalis 25240
Pathway
mcs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DR90_471 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcs03019]
    DR90_471 (rnr)
   03016 Transfer RNA biogenesis [BR:mcs03016]
    DR90_471 (rnr)
Enzymes [BR:mcs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     DR90_471 (rnr)
Messenger RNA biogenesis [BR:mcs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DR90_471 (rnr)
Transfer RNA biogenesis [BR:mcs03016]
 Prokaryotic type
  tRNA degradation factors
   DR90_471 (rnr)
SSDB
Motif
Pfam: RNB OB_RNB CSD2 S1
Other DBs
NCBI-ProteinID: AIK00503
UniProt: A0A3A9RJ52
Position
complement(500852..503164)
AA seq 770 aa
MTQTTKKTKWNDPNADIEASKYQNPIPSRLLILQTVADITNQGKPATQETLAIHFGFLDD
EDKFFALTNRLKAMLRDGQLERIDGIHFSIAPLPTILTGQVSCNPKGFGFVILDDMPDLF
LHEKQMRLVFDGDTVEAVATEYRGKTEARIIQVIKQSQLEFIGKLSLDDEGYFVQLSGAN
AHQPITVTAENVQTMNAAVGDDVKVSLIDLPTYQEFATGKITELLTSLNDRELIIETTLY
NYGIPHEFSQAALTQASKFDEPTDADFKNRVDLRHLPLITIDGEDSRDFDDAVYAEKRAG
GNYRVVVAIADVSHYVTPQSALDQDAYARGTSVYFPHRVIPMLPEALSNGLCSLNPKVDR
LCMVADIKLSRAGKVTGYEFYPAIMHSQARLTYNQVNAYFNDPTNETLPDELVRNSAVLK
SIDTLHQLYLVLDARRENRGAMAFETAETYIKFDKQGDIIDIVARTRGDAHKLIEEMMLL
ANTCAANFSLKHELPVLYRNHDKPNDEKSARLHEYVKSFGLSFPSEAPTHEDYQRIIKAT
ADRPDAISIHSMLLRSMMQANYSPDNIGHFGLAYDEYSHFTSPIRRYPDLMLHRAIKDKV
THQKPATPIYRSLDDAGEQTSLTERRAEEAARDVETWLKCHYMQRHIGDEFNATVTTVTN
FGLFVTLDALFIEGLIHISQLGDEYFTYDEREQKLIGERGSRFGLGDGLIIQVAGVNMDL
LQIDFCLIEQLNRIDKNGDSQMIPSKPTNDKSDTKNERSKKHRRKSNKSK
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgactcaaacaacaaaaaaaaccaaatggaatgaccccaatgctgatattgaagcatca
aaatatcaaaatcccattccctcacgcctattgattctacaaaccgtggcggatatcacc
aatcaaggtaagcctgccacgcaagaaacgcttgccatacactttgggtttttggatgat
gaagataaattttttgctctcaccaaccgccttaaggccatgctccgtgatgggcaactt
gagcgtatcgatggcatccattttagcatcgcaccattgccaaccatattaacaggtcaa
gtttcttgcaatcccaaaggttttggttttgttatacttgacgatatgccagatttattt
ttacacgaaaagcagatgcgtcttgtgtttgatggtgataccgttgaagcggtagcaaca
gagtatcgtggcaagactgaagcacgcattattcaagtgattaaacagagccaacttgag
tttatcggtaaattaagcttggatgatgagggttattttgtacaattatcaggtgctaat
gcccatcagcctattactgtcaccgctgagaatgtccaaacaatgaatgcagccgttggt
gatgatgtgaaggtttccttgattgatttacccacttatcaagaatttgctactggtaaa
attactgagcttttaaccagcttaaacgaccgtgaattaattattgaaaccacactgtat
aattatggtattccacatgaatttagccaagccgctttaacacaagcctcaaagtttgac
gagccaaccgatgcagactttaaaaatcgtgtggatttgcgtcatcttcccctgattact
attgacggggaagactctcgtgattttgatgatgcagtttatgctgaaaaacgcgctggc
ggtaattatcgtgttgttgttgccatcgctgatgtcagtcattatgtcacaccgcaatca
gcacttgaccaagatgcttatgcacgaggaacctctgtttattttcctcaccgtgtgatt
ccaatgctgccagaggcattatcaaatggtttatgttcactcaatcccaaggtagaccgc
ttatgtatggtggctgatattaaattatcacgggcgggtaaagtgacaggttatgaattt
tatcctgccatcatgcactcacaagccagattgacctataatcaagtcaatgcctatttc
aatgacccaaccaatgaaaccctacctgatgaactggtgcgtaatagtgcagtgctaaaa
tccatcgataccttacaccagctttatttggtactcgatgcacgccgtgaaaatcgtggt
gcgatggcatttgaaaccgcagaaacttacattaagtttgacaaacaaggagatatcatc
gatattgtggcacgcacccgaggcgatgcacataagctcatcgaggagatgatgctactt
gccaatacttgtgctgccaatttttcgctcaaacatgaattacccgttttataccgcaat
catgataagcctaatgatgaaaaatcagcacggctacatgaatatgttaaaagttttggg
ctaagctttccgagtgaagcaccaacgcatgaagactatcaaagaattatcaaagccact
gccgaccgacctgatgccatcagtattcatagtatgttgttacgctcaatgatgcaagca
aattatagccctgataatattgggcattttggcttggcttatgatgaatatagtcatttt
accagcccaatccgccgttaccctgatttgatgctacatcgtgccatcaaagataaggtg
actcaccaaaaacctgcaacacccatttatcgctctttagatgatgcaggcgagcaaacc
agtttgacagaacggcgtgctgaagaggctgctcgtgatgttgaaacttggctaaaatgt
cattatatgcagcgacatattggcgatgagtttaatgcaacggtaaccacagtgaccaat
tttggcttatttgtgacgctggatgcgttgtttattgaaggattaattcacatctcacaa
ctgggtgatgaatattttacttacgatgagcgtgaacaaaagcttattggtgaacgaggc
tcaagatttggcttgggtgatgggcttattattcaagttgctggcgtcaatatggattta
ttacaaattgatttttgcttaattgagcaattaaatcgtattgacaaaaatggcgacagc
caaatgataccctctaagcctaccaatgacaaatcagataccaaaaatgagaggtctaaa
aagcatcgccgaaaatcaaataagtcaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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