KEGG   Mobiluncus curtisii: HMPREF0573_11821
Entry
HMPREF0573_11821  CDS       T01257                                 
Name
(GenBank) S1 RNA binding domain protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
mcu  Mobiluncus curtisii
Pathway
mcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HMPREF0573_11821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcu03019]
    HMPREF0573_11821
   03009 Ribosome biogenesis [BR:mcu03009]
    HMPREF0573_11821
Enzymes [BR:mcu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     HMPREF0573_11821
Messenger RNA biogenesis [BR:mcu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HMPREF0573_11821
Ribosome biogenesis [BR:mcu03009]
 Prokaryotic type
  rRNA processing factors
   HMPREF0573_11821
SSDB
Motif
Pfam: RNase_E_G S1 PCB_OB
Other DBs
NCBI-ProteinID: ADI68140
UniProt: D6ZHN2
Position
complement(2050380..2052188)
AA seq 602 aa
MEAKRIRRKAGRKESRKRTPITEAEFLARRENVKREMVVRERDNLNQIAVLEDGLLVEHY
VSRHTQETAVGNVYLGKVQNVLSSMEAAFVDIGKGRNAVLYAGEVNWDAAGLNAKTGRIE
EALNPGDLVLVQVTKDPIGHKGARLTSQITLAGRHLVLVPSGAMTGISRKLPEEERKRLK
ALLKTMIPAGYGVIVRTAAEGATEEQLRADVERLTRIWEEIETKQRKTRNGPVLLHGEPE
LAVRVVRDIFNEDFRSLTIQGDNAWKTISKYVRDLSPELKDRLKHWEGEDDIFAAHRIDE
QLAKGFERKVWLPSGGYLIIDRTEAMTVIDVNTGRYIGAGGTLEETVTKNNLEAAEEIVR
QLRLRDIGGIVVIDFVDMVIESNRDLVLRRLVECLGRDRTRHQVTEVTSLGLIQMTRKRV
GQGLVEAFSTQCECCDGRGFIVHDVPVENNGQAPEDVVSHSSARRGSASGTSSKRGRSRA
KSVKETNPEVRQTMAAIATAAHASEEHESSATASESHSSRTTEPKLLTSSTERPSLEKAA
EEPSLERATEKPALDGAQARLELTEAETPTENTAPRRRHRRAASTGVINTDSTDADIVVS
QG
NT seq 1809 nt   +upstreamnt  +downstreamnt
ttggaagcaaaacggattcgccggaaggcgggacgaaaggagagtcgtaaacggactccc
atcacggaagcggaattcctggctcgccgagaaaacgtgaagcgcgagatggtcgtgcgc
gaacgagacaatctgaaccagattgcggttttagaggacggcttactggtcgaacattat
gtttcgcgccatacccaagagactgccgtgggtaacgtttacttgggcaaggtacaaaac
gtgctgtcctcgatggaggcggctttcgtagacattggtaagggtcgcaacgcggtcctc
tatgccggggaagtaaactgggacgccgccggtttgaatgctaagactgggcgtattgag
gaagccctcaatcctggtgacctggttttggtacaggtcaccaaggatccgattggtcat
aagggtgcccgtttgacgtcacaaattaccctggctggtcgtcacctagtgttggtgccc
agcggtgcgatgaccggtatttcacgcaaattgcctgaggaggaacgtaaacgtctgaag
gctctgctgaaaactatgattccggctgggtacggagtgattgtgcggactgctgcggag
ggcgccacggaagaacagctgcgtgccgatgtggagcgtctcactcggatttgggaagaa
atcgagacgaaacagcgcaagacccgcaacggaccggtcctgctgcacggagaacccgaa
ctggcagtgcgggtcgtgcgtgacatatttaatgaggacttccgctccctgaccattcag
ggtgacaacgcatggaagaccatttccaagtatgtgcgcgatttgtccccagaattaaag
gaccgcctgaagcattgggaaggcgaggacgacatttttgctgcccatcgtattgatgaa
cagctcgcaaaaggctttgaacgcaaagtatggctgcccagtggcggctatctcattatc
gatagaaccgaagcaatgacggtcattgatgtgaacaccgggcgctatatcggggcggga
ggcaccctggaagaaaccgtcaccaagaacaacttggaggccgccgaagaaatcgtgcgt
cagctgcggctgcgagatatcggtggcatcgtggtcatcgactttgtggacatggttatc
gaatcgaaccgggatttggtactgcgccgcctggtggaatgcttgggtcgtgatcggact
cgtcaccaggtcaccgaagtgacctccctgggtctgattcagatgacccgcaaacgggtc
gggcaggggctggtggaagccttttcgacccagtgtgaatgctgtgatgggcgtggcttc
atcgtccacgatgtgccggttgagaacaatgggcaagccccggaagacgtggtgtcacat
tcctctgcccgacgcggttcggcgtctgggaccagctcgaaacgtggtcggtcccgagcg
aaatccgtgaaggaaacaaatccggaagtgcgtcagactatggcggctatcgctaccgca
gctcatgcctctgaggaacatgagtcatccgcaaccgcctcggaatcgcactcgtcgcga
actacggaaccgaaacttttgacatcatcgacggaaagaccttccctggaaaaggctgcg
gaagaaccctccttagaaagggccaccgagaaacccgctttggatggtgcacaagcgcgc
ctagaactgactgaagccgagactcccacggagaatactgcgccgcgtcgtcgtcaccgg
agggctgcttctaccggggtcatcaatacggattccacggacgccgatattgtggtctca
caagggtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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