KEGG   Methanobacterium congolense: MCBB_0559
Entry
MCBB_0559         CDS       T04503                                 
Symbol
rad50
Name
(GenBank) DNA double-strand break repair Rad50 ATPase {ECO:0000255|HAMAP-Rule:MF_00449}
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mcub  Methanobacterium congolense
Brite
KEGG Orthology (KO) [BR:mcub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcub03400]
    MCBB_0559 (rad50)
DNA repair and recombination proteins [BR:mcub03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MCBB_0559 (rad50)
    Archaeal homologous recombinant proteins
     MCBB_0559 (rad50)
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_27 AAA_15 AAA_21 SbcC_Walker_B MukB Rad50_zn_hook AAA_29 DUF2730 ABC_tran BLOC1_2 AAA_16 RsgA_GTPase
Other DBs
NCBI-ProteinID: SCG85134
UniProt: A0A1D3L0F7
Position
I:561524..564226
AA seq 900 aa
MIIENIKMENFKSHRNTSVDLGTGISIVMGENGAGKSSILEAVSFALFKQHSGKRMEQLI
MNNTDKMSVTLTFQVNGRRYRIKRDRSKKSGAHAKLGIMDENNFMPMATGEKTVTEEVKR
LLEMDGDLFLNAVYVRQGEIADLIEKSPAEKKQMIGKLLGIESLEKAWKNMKILLDQYNG
EKLKLEGRLEALKDLKSDLKVQNKDKDTIQAKIQKITGDIEETEAEYKSLQDKNDSLNSK
KSDFETTSSALESRKNLVERMEADEKYLRIKLDEIEATEKRINQLKPKIDKLPVLKGMQD
AKDELKGLKKEEAILNKIIHDINGFKEILSSNESHYKDYLKLESEICSLQYARDQFAGNR
SLLDNYRDRRKKVQTKMEQSMEKVSDVLEKSSKILNTDFDSVEDVEAHLESVKPEVEARL
KEAVEDIHKVQTEISNIKIQNKGLETPIQELKHVEDVCPICKSNITPQKREELLNGYLSE
METNKKRYSKLEKSLKQLKVKKGIFESKSLKIQDINLGIINEYMGAVEDSKKDIEDIDSK
VAELEDKMKILEELNADINNKNKVLEGLKGKYEAYIGAKNSLESLKDSEKYEEDLAKIQY
HVEALKTKISSFVDIAGGIVENLQEEINYLEGLKAEYHKLSGAVAQKESFSTRLMETMAA
LEGTRTEIQDLTLKLEAVAYNEEAHELVKKDLDAKTILLNDLKGQKQRFSGEESQITRSI
EEIHKKIESYSVDEKKLTGLKDFMKLLDYIRDLYGKDGVQRDLRNLSRPLIEHNTRDFFE
KFNFEYSDIKLDEDYDVTIYGPAGQNSLDMISGGEKIAVALALRLGITQTLSGGNLELIM
LDEPTIHLDAYRRQELIELLKKMSIIPQMIIVTHETDLEDAADNILRVKKEEGESFVVNS
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgataattgagaacatcaagatggagaacttcaaatcccacagaaacaccagcgtggat
cttggcacaggaatatccatagttatgggcgaaaatggtgctggaaaatccagtatactt
gaagcagtgagcttcgcactcttcaaacagcactcaggaaagagaatggagcagctcata
atgaacaacacagataaaatgagtgttacactaaccttccaggtgaacggaaggaggtac
cgtataaaaagggacagaagcaaaaaatcaggtgcacacgccaaattaggaatcatggat
gaaaacaatttcatgccaatggccacaggggaaaagacagtaacagaagaggttaaaaga
cttcttgagatggatggagaccttttcttaaatgcggtctacgtcagacagggtgaaata
gcggatttaattgaaaaatcacccgctgaaaagaagcagatgataggaaaactcctggga
atagaatcccttgaaaaggcatggaagaacatgaagatcctcctggaccagtacaacggg
gaaaaattaaagcttgaaggtcgcctggaagcattaaaagatctcaagagtgatttgaaa
gttcaaaataaagataaagatactattcaagctaaaattcaaaaaatcacaggggacatt
gaagaaactgaagcagaatacaaatctttacaggataagaatgattcattaaactccaaa
aaatcagactttgaaacgaccagttctgccctggagtcccggaaaaatcttgttgaaagg
atggaggccgatgaaaaatatctaaggatcaaattagatgaaattgaagccactgaaaag
aggataaatcaattaaaacccaaaatcgataaattacctgttttaaagggaatgcaagat
gcaaaagatgaacttaaaggtcttaaaaaggaagaagccatcttaaataaaataatccat
gatataaatggttttaaggagatattaagttccaatgaatcacattacaaggactatctg
aaattggaatctgaaatttgcagccttcagtacgccagggatcagttcgcaggcaacaga
agtttactggacaactaccgggataggagaaaaaaagtccaaactaaaatggaacaatcc
atggagaaggtttcagatgttcttgaaaagtccagcaaaattctcaacacagactttgat
tcagtggaggatgtggaagcacaccttgaatctgtgaaacctgaggttgaagcacggtta
aaggaggcagttgaagatatccacaaggttcaaactgaaatatcaaacattaaaatccag
aacaaaggacttgaaacccctatacaagaattgaaacatgttgaagatgtttgtccaata
tgtaaatcaaacataactcctcaaaaacgtgaagaacttttaaatgggtacctttctgaa
atggaaactaacaagaagagatattcgaaacttgagaagagtctgaagcaactgaaggtt
aaaaaaggaatatttgaatctaaaagtcttaaaatacaggatattaaccttggaataata
aatgagtacatgggtgcagttgaagatagtaaaaaggatattgaagatatagattcaaag
gttgcagagcttgaagacaagatgaagatccttgaagaacttaacgcagatataaataat
aaaaataaggttcttgagggtctgaaaggtaaatatgaagcttacattggtgctaaaaat
tctctggagtctctgaaggactctgagaagtacgaagaagatctggctaagatccagtac
catgttgaagctttgaaaacaaagataagcagcttcgttgatattgcagggggcattgtt
gaaaaccttcaggaagaaataaattatttagaaggccttaaagctgaatatcacaagctt
tcaggagctgtggcccagaaagaatcattcagcacaagactcatggaaacaatggctgca
cttgaagggaccaggacagagattcaggatttgactttgaaactggaagctgttgcatac
aatgaggaggcccatgaactggttaaaaaagatcttgatgctaaaactattcttctgaat
gatcttaagggtcaaaaacagaggttttcaggtgaagaatcccagatcacacgttctatt
gaggaaatccacaagaaaattgagtcttacagtgttgatgagaagaaactcacgggcctg
aaagacttcatgaaacttctagattatataagagacctttacggtaaagatggggttcaa
agggatcttagaaacctttcaaggccactcatagaacataacacaagggacttctttgaa
aagttcaacttcgagtactcggatataaaactggatgaggattatgatgttaccatatac
ggtcctgcaggtcagaacagtcttgatatgataagtggtggtgaaaaaattgcagtggcc
ctggccctcaggcttggaataacccagacactttcaggggggaacctggaacttataatg
ctggatgaaccaacgatacacctcgatgcctacaggagacaggaactcatagaactcctg
aagaagatgtccataatacctcagatgatcatagtcacccatgaaacagaccttgaagat
gctgcagacaatatattgagggttaaaaaagaggaaggggaatcgtttgttgtgaactcc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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