KEGG   Methylomonas sp. DH-1: AYM39_10570
Entry
AYM39_10570       CDS       T04396                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
mdh  Methylomonas sp. DH-1
Brite
KEGG Orthology (KO) [BR:mdh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdh03021]
    AYM39_10570
Transcription machinery [BR:mdh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AYM39_10570
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 DUF3562 IF2_N
Other DBs
NCBI-ProteinID: ANE55577
UniProt: A0A172U9E8
Position
2381261..2382241
AA seq 326 aa
MMEETLDVIKDMDIPDFISFEDVEDEVVEVDPTETFKLAEIESNDSQSDSGFDATRAYLN
ELSKSQLLTADEEKIYGKRTQQGDPQARKIMIESNLRLVVKISRRYLNRGLPLLDLIEEG
NLGLIRAVEKFDPDRGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKEMNIYLKAQR
NLAQQLDHEPTVDEIAKHLDKPAKTVSKMLKLNERVTSVDVSFGKDFDKPLLETISEEES
RNPAEILQDDFIQHNVTYWVYQLAEKQREVICRRYGLCGFENATLEQVALELGVTRERVR
QIQMDGLKRLKEILESSGYSFESIFS
NT seq 981 nt   +upstreamnt  +downstreamnt
atgatggaagaaactttagacgtaataaaagatatggatattccggattttatttctttt
gaggatgtggaggacgaagtagttgaagtcgatcctaccgaaactttcaaacttgcagag
atagagagcaacgattcgcagagcgacagcggcttcgacgcgacgcgcgcttatcttaac
gaactcagtaaatcccagttattgactgccgacgaggaaaaaatatacggcaaacgcacc
cagcagggcgacccgcaagcacgaaaaatcatgatcgaaagcaatctgcgcttggtggtc
aagatttcccgccgctatttgaacagaggcttaccgttgctcgatttgatcgaggaaggc
aacctgggtttgatccgggccgtagaaaaattcgatccggaccgcggtttccgtttttcc
acctatgccacttggtggattagacaaaccatcgagcgggcgattatgaaccagacccgg
acgattcgtttgccgatccacatcgtcaaggaaatgaacatctatttgaaagcgcaacgg
aatctggcgcaacagcttgaccacgaaccgacggtcgacgaaattgccaaacatctggac
aaaccggcaaaaaccgtcagtaaaatgctgaaactgaacgaacgggtgacatcggtcgac
gtttctttcggtaaggatttcgataagccgttgctggaaaccatatccgaggaagaaagc
cgcaatcctgcggaaatactgcaagatgatttcatccaacacaacgtcacctattgggtg
taccaattggccgagaagcaacgcgaggtgatttgccggcgctacggcttgtgcggtttc
gaaaacgccacactggaacaagtcgcgttggaattaggcgtaactcgcgaacgggttcgg
caaatccagatggacggcttgaagcgcttgaaggaaatcctggaaagcagcggttattcc
ttcgaatccatcttcagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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