KEGG   Methylorubrum extorquens DM4: METDI4593
Entry
METDI4593         CDS       T00947                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
mdi  Methylorubrum extorquens DM4
Pathway
mdi00020  Citrate cycle (TCA cycle)
mdi00190  Oxidative phosphorylation
mdi00650  Butanoate metabolism
mdi01100  Metabolic pathways
mdi01110  Biosynthesis of secondary metabolites
mdi01120  Microbial metabolism in diverse environments
mdi01200  Carbon metabolism
Module
mdi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mdi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mdi_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    METDI4593 (sdhA)
   00650 Butanoate metabolism
    METDI4593 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    METDI4593 (sdhA)
Enzymes [BR:mdi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     METDI4593 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA DAO Pyr_redox_2 Thi4 HI0933_like FAD_binding_3
Other DBs
NCBI-ProteinID: CAX26216
UniProt: C7CGA4
Position
4471578..4473395
AA seq 605 aa
MASNGTNGGAPAYAITDHTFDVVIVGAGGAGLRATVGCSQAGLRTACITKVFPTRSHTVA
AQGGISASLGNMGPDDWRWHMYDTVKGSDWLGDQDAIEYLVRNAPAAVYELEHWGVPFSR
TDEGKIYQRPFGGMTTDYGKGTAQRTCAAADRTGHAMLHTLYGQAVKNKTQFFIEYFALD
LIMDEDGRCRGVMAIDQATGEIHRFRAQQTILATGGYGRAYFSATSAHTCTGDGNAMVLR
AGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDV
VSRSMTMEIRDGRGVGKEGDHIFLHLDHLDPKILHERLPGISESAKIFAGVDVTKEPIPV
LPTVHYNMGGIPTNFHGEVLTLKNGNPDTVVPGLMALGEAACVSVHGANRLGSNSLIDLV
VFGRAAGLRCADIVEPDARQPELPKGSADKALTRLDRFRYADGGTPTAQLRDRMQRTMQN
NCAVFRTGEVLEEGKGLIHEVWRGVSDIAITDRSLVWNTDLLETLEFDNLIGQAVVTMES
AVNRKESRGAHAREDFPDRDDKEWMKHTLAWLDQSKHGVEIDYRPVHTYTMSNDIQYIEP
KARVY
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggcctccaacggaacgaacggcggcgcgcccgcctacgccatcaccgaccacaccttc
gacgtggtgatcgtcggcgccggcggcgcgggtctgcgcgccacggtcggctgctcccag
gccgggcttcgcaccgcctgcatcaccaaagtcttcccgacccgctcgcacaccgtggcg
gcgcagggcggcatctccgcctcgctcggcaatatggggccggacgattggcgctggcac
atgtacgacaccgtgaagggctcggactggctcggcgaccaggacgcgatcgagtacctc
gttcgcaacgcgcccgccgccgtctacgaactcgagcactggggcgtgccgttctcccgc
acggacgagggcaagatctaccagcggcccttcggcggcatgaccaccgattacggcaag
ggcaccgcccagcgcacctgcgccgcggccgaccgcaccggccacgccatgctccatacg
ctctacgggcaggcggtgaagaacaagacccagttcttcatcgagtacttcgccctcgac
ctgatcatggacgaggacggccgctgccgcggcgtgatggcgatcgaccaggccaccggc
gagatccaccgcttccgcgcccagcagaccatcctcgccaccggcggctacggccgcgcc
tacttctcggcgacctcggcccatacctgcaccggtgacggcaatgccatggtgctgcgc
gccggcctgccgctgcaggacatggagttcgtgcagttccaccccaccggcatctacggc
gccggctgcctcatcacggagggcgcgcgcggcgagggcggctacctcaccaactccgag
ggcgagcgcttcatggagcgctacgccccctcggccaaggacctcgcctcccgcgacgtg
gtctcccgctccatgaccatggagatccgcgacggccgcggcgtgggcaaggaaggcgac
cacatcttcctgcatctcgaccatctcgacccgaagatcctgcacgagcgcctgcccggc
atctcggagagcgcaaagatctttgcgggcgtcgacgtgaccaaggagccgatcccggtc
ctgccgacggtccactacaacatgggcggcatcccgacgaacttccacggcgaggtgctg
actctgaagaacggcaaccccgacacggtggtgccgggcctgatggcgctcggcgaggcg
gcctgcgtctcggtgcatggcgccaaccgcctcggctcgaactcgctgatcgacctcgtg
gtgttcggccgcgccgcgggtctccgctgcgccgacatcgtcgagcccgacgcccgccag
ccggaactgccgaagggctcggccgacaaggcgctcacgcgcctcgaccgcttccgctac
gccgacggcggcaccccgaccgcgcagctgcgcgaccggatgcagcggacgatgcagaac
aactgcgccgtcttccgcaccggcgaggtgctggaggagggcaagggcctgatccacgag
gtttggcgcggcgtctccgacatcgcgatcaccgaccgttcgctggtgtggaacaccgac
ctgctcgagaccctggaattcgacaacctgatcggtcaggcggtcgtgaccatggaatcg
gcggtcaaccgcaaggaaagccgcggcgcgcatgcccgcgaggacttccccgaccgcgac
gacaaggagtggatgaagcacacgctcgcgtggctcgaccaatccaagcacggcgtcgag
atcgattaccgcccggtccacacctacacgatgtcgaacgacatccagtacatcgagccg
aaggcgcgagtgtactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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