KEGG   Malus domestica (apple): 103403174
Entry
103403174         CDS       T03194                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit-like
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103403174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103403174
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103403174
DNA replication proteins [BR:mdm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    103403174
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N DNA_pol_B_2 TAF4 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 103403174
NCBI-ProteinID: XP_028947818
Position
2:15335979..15349138
AA seq 1532 aa
MADDEQATAATGRRRGRGPEASARAGALERLNALRHGGRRSETGGFQIKMEDRIYDTVGD
DEYDAIVSKRREEVRGFIVDDNGLGYCDEGEEEDWTRAXPSSDESDGGDRPKRKKVEKKE
KDKDKEPRPKKSNSSLTAAAAMMGKQRLSSMFTSSIFGKNRDNERGKGLNCDSIVDDVIA
EFTPDENDRGKRRGQLNKIFVLNSSVKSEIGSDRGVNIAMKVELDRVVASGSDSVVGSVQ
IYEGVEENEGKKEVVFEVGDPPIEEIHDFSEREGAIEEKNVNFIEEKVEPVKKKEEVFTL
NAKIKEDNKDPSLSAMAGWKAVRTGGDGNVGGSVLEVNSGSNNEELLQCDLEEHGSLPFY
MIDAYEEFYGANMGKLYLFGKAKAGSSYQSCCVVVENMQRCVYAIPNSSVFHSDEIMKLE
KDAEESRISSREFRTKLHDMALGLKSDIAKKLLDQNVSAFSMALVKRNYAFERSDIPAGE
NYVLKINYPFKDPRLPADLKGETFHALLGTHSSALELFLVKRKIKGPSWLSVSGSEFRTV
SQRVSWCKFEVVVKSAKDIQVSNCPKKTAEAPPVLVVTAISLKTINFDEIVSASVICCHK
AKIDTPVLASEWTRPGMLSHFTVVRKLDGGIFPMGVTKEATEKNSKAGSNVLSIESTERA
LLNRLMIELHKLDSDVLVGHNISGFDLDVLLRRAKACKVPNAMWSKIGRLKCSVMPDLAK
GGTIFGSGASQGIMSCISGRLLCDTYLCSRDLLREVSYSLTQLAKTQLNKDRKEILPHEI
PRMFQKSEFLMELIEYGETDAWLSMELMFHLSVLPLTRQLTKISGNLWGKTLQGARAQRV
EYLLLHAFHAKKYIVPDKMHLKETDSVKRKTDNGVDDKNVDELDVNFDNDAKKDHGKGKK
GPAYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSEGLAPRLPYCKK
IGLLPELLKDLVERRRNVKKWMKTASGLKIQQLDIQQQALKLTAHSMYGCLGFPNSRFYA
KPLAELITLQGREILQSTVDLGQNNLNLEVIYGDTDSMMIYSGLDDIAKAKAIARKVIQE
VNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKNEMPYEVIERKGLDMVCQDWSLLSK
EMGDFCLSQILSGGSCEDVVESIHDALMKVQEEMRNGQVALEKYVITKSLTKPPEAYPDA
KNQPHVQVALRLKQSGYSAGCSAGDTVPYIICCEQGTSLGNSTVIAQRARHPDELKREDG
KWMIDIDYYLSQQIHPVVSRLCASIQGTSPXRLADCLGLDSSKFKGDSSEAVRDDPSNLS
LLLDDEERFRGCEPLILACPSCSDTFSCPTILNSISMSITKKQTKSQAEECTSDFWYTLR
CAKCPGEGDMGRLSPVMIANQVKRQVDGFVSMYYRGFMTCDDESCQYNTRSLNLRLVGNA
ERGTVCPDYPRCNGRLVRKYTEADVYKQLSFFCHVLDTVRCIEKTEASTRLPVEMELAKL
RSVVNLAASTVQRIRDRCAYGWIQLQDLCITV
NT seq 4599 nt   +upstreamnt  +downstreamnt
atggcggacgacgagcaagcgacggcggccaccggtaggcggcggggccgaggaccagag
gcgtcggcccgtgccggagccctcgaacgcctcaatgctctccgtcatggcggccgccga
tctgaaactggcgggttccaaatcaagatggaggatagaatctacgacaccgtcggagac
gacgagtatgacgcaattgtttccaaacgacgggaagaggtccgaggcttcatcgtagac
gacaatggcctagggtactgcgatgagggcgaggaagaggactggacccgggcgngtccg
tcatcggatgaatcagacggcggtgataggcccaagaggaagaaagtcgagaaaaaggaa
aaagacaaggacaaagagcctcggcccaaaaagtccaattcgtcgctcacggcggcggct
gcgatgatgggaaagcagaggctttcgtcgatgttcacgtcgtcgatttttgggaaaaat
agagataatgaaagggggaaagggttgaattgtgatagtattgtcgatgatgtgattgcg
gagtttacgccggatgagaatgacagagggaagcggaggggacaattgaacaagattttt
gtgttgaattcgagtgttaagagtgaaattgggtctgataggggtgtcaatatagcaatg
aaggttgaattggatagagttgtggcaagtggtagtgattctgtggtgggttctgtgcag
atttatgaaggggttgaagaaaatgagggcaagaaggaggtggtttttgaagtcggtgat
cccccaattgaggaaatccatgatttttcagagagggaaggggcaattgaggagaaaaat
gtgaattttattgaagagaaagtggaacctgtgaagaaaaaggaagaggttttcactttg
aatgcaaagattaaggaagataataaggacccgtcattgagtgctatggctggatggaag
gccgtgaggactggaggggatgggaatgttggtggcagcgttttggaggtcaatagtggc
tcaaataacgaagagcttttgcagtgtgatctggaagaacatggttcactgcctttttac
atgattgatgcttatgaagagttctatggtgctaatatgggcaagctttatctgtttggg
aaggccaaagcaggaagttcataccagagttgttgtgtggttgtagagaacatgcagaga
tgtgtctacgcaattccaaacagttctgtatttcacagtgatgaaatcatgaagcttgaa
aaggatgctgaagagtcgaggatatcatccagagaattccgtacaaagctgcatgacatg
gctttgggtttaaagagtgacatagcaaagaagttgttggatcaaaatgtatcagctttt
agcatggcactggttaagagaaactatgcatttgagcgatctgacatacctgccggagag
aattatgtacttaagatcaattatccattcaaggatccccgacttccagcagatctcaaa
ggagaaacattccatgctcttctaggaacacatagcagtgcgttggagctttttcttgtt
aaaaggaagataaaaggaccttcttggctatcagtttcaggttctgagtttcgcacagtt
tcacaacgggtaagttggtgcaaatttgaggtggtcgttaaatctgcaaaagacatacag
gtctcaaattgcccaaagaaaactgcagaggctcccccagtgttggttgttactgcaata
agtttgaaaactattaattttgatgaaattgtctctgcatctgttatctgctgtcacaag
gccaagattgacactcccgtgttggcatcagagtggacgagacctggcatgctgagccat
tttactgttgtccgtaaacttgatggaggcatatttcccatgggcgtcactaaggaggct
acagaaaagaattctaaagctggatcaaatgttttaagcatcgaaagcaccgaaagggct
ttactaaaccgtttgatgattgaattacacaagttggacagtgatgttcttgttggacac
aatatatctggatttgacctggatgtcctactccgtagagctaaggcttgtaaggtgcca
aatgccatgtggtccaaaataggccgtctcaagtgttctgtgatgcctgaccttgcaaaa
ggaggcaccatttttggatctggagcaagtcaagggatcatgtcctgcatttctggtcgc
cttttgtgtgatacatacttgtgttcccgtgacttgttaagggaggttagctattctttg
acacaacttgcaaagactcagctgaataaagaccgaaaggagatcttgccgcatgaaatt
cctagaatgttccagaaatcagaatttctaatggaactgattgaatatggtgagacagat
gcatggctgtctatggaactcatgtttcatttgagtgttcttcccctcacccgccagctg
acaaagataagcggtaatctgtgggggaaaaccctacaaggtgctagggcacaaagagta
gaatatcttttgctgcatgcattccatgcaaaaaaatatattgttccagacaagatgcat
ctgaaggaaacagattcggtaaagcgtaaaacagataatggtgttgatgataaaaatgtt
gatgagttggatgtaaattttgataatgatgcaaagaaggatcatgggaaaggcaagaaa
ggtcctgcctatgcaggtggattggtattggagccaaaaagagggttatatgacaagtat
atattacttctcgacttcaatagtctttacccgtctattattcaggaatacaatatctgt
ttcacaacagtggaaagatcttcagaaggattggctcctcgtttaccatattgtaaaaaa
attgggctcctacctgagttgttaaaagatctagttgaaaggaggagaaatgtaaagaaa
tggatgaagactgcatctggtctcaagatccagcaacttgacattcaacagcaagctcta
aagctgacggcacatagtatgtatggatgcttggggtttccgaattcgagattttatgca
aagccactggcagagcttataacactgcaagggagagagattctgcaaagtactgttgat
cttggtcagaacaatttgaacctagaggtgatctatggtgatactgattcaatgatgatt
tatagtggactggatgatattgcaaaagcaaaagcaatcgcacggaaagtcattcaagag
gttaacaagaagtataggtgtttggaaattgatcttgacgggttgtacaagagaatgctg
cttctcaagaaaaagaaatatgcagctgtgaaggtgcaattcaagaatgagatgccctat
gaggttattgagcgtaagggtcttgatatggtttgccaggactggagcttactttcaaag
gaaatgggagatttctgcctaagtcaaattttatcaggagggtcatgtgaggatgtcgtt
gaatcaattcatgacgctctgatgaaggtgcaagaggagatgagaaacggacaagtagca
cttgagaaatatgtcatcactaagtcattgactaaaccacctgaagcatacccagatgcc
aaaaaccaaccacatgttcaggtggcattaagattaaagcaaagtggttattctgctggt
tgttctgctggcgatacagtcccctatatcatttgctgtgagcaggggactagtttaggt
aattcaacggtgattgctcaacgtgctagacaccccgatgagttaaaacgagaagatggg
aaatggatgattgacattgattactacttgtcccagcagattcatcctgtggtatcacgt
ctttgtgcttcaattcagggtaccagcccgngacgcttggctgattgtttaggacttgac
tcttctaagttcaaaggtgactcaagtgaagctgtcagagatgatccttccaacttgtcc
cttcttcttgatgatgaagagagatttcgcggttgtgagcctttgatcttggcatgtcct
agctgttccgatacttttagttgtccaactatcttgaattccatttctatgtcaatcacc
aaaaagcaaacaaagtcacaagccgaggagtgtaccagcgatttttggtatacattacga
tgtgcaaaatgccccggggaaggagacatgggcagactgtctcctgtaatgatagccaac
caggtgaaaaggcaagtagacggttttgtttcaatgtactataggggctttatgacgtgt
gacgatgaatcttgccagtacaacacacgaagtctcaacctccggcttgttggcaatgct
gagaggggaacagtttgtccagactaccctcgctgcaatgggcgtcttgtaagaaagtac
acggaagcagatgtgtacaagcagctctcgtttttctgccatgtcttggatacagtgcgc
tgcatagaaaagacggaggcaagcactagactaccggtagagatggagttggccaaactt
cggtcagttgtgaatttggctgcctcaacagttcagaggattcgggaccgttgtgcgtac
ggatggatacagctgcaagatctttgcattacagtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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