KEGG   Malus domestica (apple): 103419292
Entry
103419292         CDS       T03194                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like isoform X2
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103419292
Enzymes [BR:mdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103419292
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  90S particles
   Helicases
    103419292
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 T4SS-DNA_transf AAA_19
Other DBs
NCBI-GeneID: 103419292
NCBI-ProteinID: XP_008355627
Position
4:19095893..19100180
AA seq 535 aa
MEEGTSFLFSGVNFNRKKFATDFSRFQNKESEKVVEDSSLLEIPKSEAEVEAEKEEPVVP
VKKRKRKGEVSEGVEGISVFKTSKSAKAAKAGKEKPGNEITEQKKKLNRQLERDSLTRKK
YNIHVSGNNIPSPLDNFADLSSRYGCEPYLLQNLAELGFKEPTPIQRQAIPVLLSGRECF
ACAPTGSGKTLAFVCPMLMKLKHTSKDGIRAVILCPTRELAAQTTRECKKMAKGNKFYIK
LMTKELARNADFSKIRCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELGLLKQ
IDSVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASDTIKQKLVFAG
SEEGKLLALRQSFKESLNPPVLIFLQSKERAKELYGELLFENVRVGAIHSDLSQTQRENA
VDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRSGEAIT
FYTEADIPYLRNIANVMSTSGCEVPSWIMALRKQKWKKHRPGRESISTQPKDEKE
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggaagaaggcacttcatttttgttctccggcgtcaacttcaaccggaaaaagtttgcc
acggacttctccagattccagaacaaagagagcgagaaagtggtagaagattcgagcttg
ttggaaattccaaaatctgaggcggaggtggaggcagagaaggaggagccagtagtgccg
gttaagaagaggaagcggaagggggaggtttccgagggtgtggaggggattagtgtcttt
aagacctcaaaatcggcgaaggcagcgaaagcggggaaagagaagcctggcaatgaaatc
acggagcagaagaagaagttgaatcggcaactcgagcgggattcgctgacgcgaaagaag
tataacattcatgtgtccgggaataacatcccttcaccacttgataattttgcagactta
tcctcaagatatggatgcgagccatatttacttcagaatttggcagaacttggatttaaa
gaaccaacgccaatccaaaggcaggctattccagtcctcttatctggtcgagaatgcttt
gcttgtgctccaactggatctggaaaaactcttgcttttgtttgtcccatgctaatgaaa
cttaagcatacatctaaggatggtatccgagctgttattctttgtccaacacgtgagtta
gctgctcagacaaccagagagtgcaaaaagatggcaaaaggaaataaattctacatcaag
ttaatgaccaaagagcttgcaagaaatgccgatttttcaaaaatacgctgtgatatactc
atttctactccacttcggttacggttggctatccggaaaaagaaggttgatttaagcagg
gttgagtatctggtattggatgagtctgataagctttttgagcttggcttgttaaagcag
attgattctgtggtcaaagcatgttcgaacccttcaattattcgctccttatttagtgct
actttacctgatttcgttgaggagcttgcccgcaccataatgcatgatgctgttcgagtt
atcattggcaggaaaaatactgcttctgacactatcaagcaaaaactggtctttgctgga
agtgaagaagggaagctattagcacttcgtcaaagctttaaggagagtctgaatccacca
gtgctgatatttttacaaagcaaggagcgagctaaggaactctacggagaactgttgttt
gagaatgtaagagttggtgccatacattctgatctgtcacaaacacagcgagaaaatgct
gtagatgacttcagagctggaaaaacatgggttttaattgccactgatgttattgctcgg
ggtatggatttcaaaggtgtcaactgtgtaattaattatgattttccagattctgcggct
gcgtacattcacaggattggtcggtgtggacgagcagggaggagcggagaagctattact
ttctacacagaggcagatattccatatctacggaatatagctaatgtgatgtcaacatca
ggttgtgaagttccgtcttggatcatggccttgcgcaaacagaagtggaaaaaacaccga
cccggaagagaatcgatatcaacccaaccgaaagatgagaaggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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