KEGG   Malus domestica (apple): 103427855
Entry
103427855         CDS       T03194                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103427855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103427855
   03036 Chromosome and associated proteins [BR:mdm03036]
    103427855
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103427855
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103427855
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     103427855
    Noncanonical PRC1 (PRC1.1)
     103427855
    Noncanonical PRC1 (PRC1.3/1.5)
     103427855
    Noncanonical PRC1 (PRC1.6)
     103427855
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_6 zf-RING_4 zf-rbx1 zf-UDP zf-Nse zf-C3HC4_5 DUF4695 zf-RING_10 ZNF512_C2H2 zf-RING_11
Other DBs
NCBI-GeneID: 103427855
NCBI-ProteinID: XP_008364159
Position
5:complement(44303099..44308672)
AA seq 439 aa
MPAQKRTHEAMEDDPPQNHRENSHETPQDEEESDRSPSQSTEEKDEFVIVKLAEIRKEVQ
CPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLI
AAIYPDIDKYEEEELAFHEEEKARNKQIQASIAQTFRRQTEALGRKRTTAKATAAAFMRR
SRGSYRNARGRRSYRNVAEHQGSNDNEDVNGDDCGRDLSSGDERTEPRPKRSKRWRGDRY
YQPSSAAANADSDDENDYEMNKSEILGASVGRVGSSERLSWGKGGMRSHTRYGSTSGGSG
KNARNIRLSKLVEYLRNPGDNDDELDIHLLLVSLDEQRIPSLQRPYLCCRSTLSVGQLCQ
YVALRTACQAEEVEIYLVKELHAEFSHSTATNIQISKSLVLDSSKENLQLLKEEETLAEL
RTHNLIPGYLILAYQKKWN
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgccggcacagaagcgcacccatgaggccatggaagatgatcctccgcagaaccaccgc
gaaaacagccacgaaacgccgcaagacgaagaggagtccgatcgaagcccgtcgcagagc
accgaagagaaagacgaatttgtcatagtgaaattggcagaaattcggaaagaagtccag
tgccccatctgtttagggatcattcggaaaacaaggacagtgatggaatgcctgcatcgc
ttctgcagggaatgcattgacaagtccatgcgcctggggaacaatgaatgccctgcctgc
cgcacccattgtgcaagtcgtcgctctttgagagatgacccaaattacgactccttaatt
gcagctatatatccggatattgacaagtatgaggaagaggaattggcttttcatgaagag
gagaaggctcgcaataagcagatccaagcttccattgcccagacatttcgacggcaaacc
gaggcactaggaaggaaacgaacaacagctaaagccacagcagctgcatttatgaggaga
tcacggggtagctatcgaaatgcgagggggagaaggagctatagaaatgttgctgaacat
caagggtcgaatgacaatgaggatgtaaatggtgatgattgtggtagagatttatcttcg
ggtgatgagcgcacagaaccaagaccgaagagatccaaaagatggagaggagatcgatat
tatcagccctcatcggcagctgctaatgcagatagtgatgatgaaaatgattatgaaatg
aacaaatcagagattctgggtgcatctgtggggcgtgttggcagctcagagaggctttcc
tggggaaaaggtggcatgcggagtcatacacggtatggcagtacaagtggtggcagtggt
aaaaatgccaggaacatccgtctctctaagttggtagagtatcttcgaaacccaggagat
aatgatgacgagttggacatccacctcctgcttgtgtctttggatgagcaaagaatacca
agtttgcagcggccgtatctttgctgcaggtctactctgtcagttggacaactatgtcag
tatgtagctctccgaacggcgtgtcaagctgaagaagttgaaatatacttggtgaaagag
ctgcatgccgaattcagtcattcaactgccaccaatattcaaatttccaagtctcttgtt
ctggattcaagcaaagaaaacctgcaacttttaaaagaagaagaaactttggcagaactt
agaactcacaatctcattcctggctatctgattttggcatatcagaagaagtggaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system