KEGG   Malus domestica (apple): 103431441
Entry
103431441         CDS       T03194                                 
Name
(RefSeq) DNA topoisomerase 3-alpha
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103431441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103431441
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103431441
Enzymes [BR:mdm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     103431441
DNA replication proteins [BR:mdm03032]
 Eukaryotic type
  DNA Topoisomerases
   103431441
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     103431441
   FA (Fanconi anemia) pathway
     103431441
SSDB
Motif
Pfam: Topoisom_bac Toprim zf-GRF zf-C4_Topoisom zf-C2H2_10
Other DBs
NCBI-GeneID: 103431441
NCBI-ProteinID: XP_028950446
Position
15:9786109..9812394
AA seq 969 aa
MSGGIRVLNVAEKPSVAKSVATLLSGNQGQGLRVREGRSRYNKIYEFNYSINGRPCHMLV
TSVTGHLMELEFEDRFRKWHACDPALLFTAPVHKKVPEDKLDIKRTLEEEARRCQWLVLW
LDCDREGENIAFEVIEVCTAVNRHLTIRRARFSALTERDIYNAVQNLVNANKFFADAVDA
RQEIDLRIGASFTRFQTMLLRDAFVIDSTASDRNLVLSYGPCQFPTLGFVVERYWEIQSH
EPEEFWTINCSHRSDEGIATFHWMRGHLFDYACAVVIYEMCVEEPTATVTKVRQQEKLKK
PPNPLNTIQLEQRASIYFRMSSEHTMKVAEELYQAGFISYPRTETDGFSERTDLRAIVEE
QQRHPGWGSYAQRLLDPASGLWKNPSNGGHDDKAHPPIHPTKFSSGESGWSQDHHRLYEL
VVRHFLACVSQPAVGAETTVEIDIAGELFSASGRVILAKNYLDVYRFESWGGSLLPTYEY
GQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDSS
MRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGAKSKAEVLETCLQQMKAC
FLDARLNKVKLFEAMSVFFERSGRPSGDDQHTSGEFIRRCGLCHEADMVLRQNRDGNFMV
GCLGYPQCRNAVWLPGSVSEAAVTTNVCNSCTPGPVYLIQFTFRRLEIPPNYSANHLGCI
GGCDETLRQLTEICGTGSRLSARGRGPATSNNNVPRSNTRQGPCIYCHQAGHSSGDCPSQ
SSGPRRVRPQSMNVQSARGGGPAMSNNVQRSNTRQGACIYCHQTGHSSGDCPSQSSGPQS
ARPRPMNVQSGQVSISCSTCGAPCALRTANTTANRGRKFYSCQSQACNFFVWEDSLNNDN
GGRGFQRANVSASASNPTRNGGSGRGGRGAGDAAGVSFVSATGDPVSGRRCFACGDPSHF
ANVCPNRGN
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgtcagggggtattagggtgctgaacgtggcggagaagccatcggtggctaagtcggtg
gcgacattactgtcagggaaccaagggcaagggctgagagtgagggaaggccgatcccgc
tacaacaaaatctacgagttcaactactcaatcaatggccgcccctgccacatgctcgtc
acctccgtcaccggccacctcatggagctcgaatttgaggaccgctttcgaaagtggcac
gcctgcgaccccgcccttctctttaccgctcccgtccataaaaaagtccctgaggacaag
ttggatatcaagaggacgttagaggaggaagcaaggaggtgccagtggcttgtcttgtgg
ctcgattgtgatagagaaggagaaaacattgcgtttgaagtcatagaagtatgcacagcc
gtgaatcgtcatcttaccataaggagggctcgtttctcagctttgactgaaagggatatc
tataatgcagtgcagaatcttgtcaacgcaaacaaattctttgctgatgcagtggatgct
aggcaagaaatagatcttcggattggtgcttcgtttactaggtttcagactatgctgctg
agagatgcatttgttattgattccactgcaagtgacagaaatcttgttctaagttatggt
ccttgccagttccctacacttggatttgttgtggagagatattgggaaatacagtcgcac
gagccagaggagttttggaccataaactgttcacacagatcagatgaaggcattgctaca
ttccattggatgcgtggacatttatttgactacgcttgtgctgttgttatttatgaaatg
tgtgttgaggaaccaactgctactgtgacaaaggttagacaacaggagaagctgaaaaag
cctccaaatcctctgaatacaattcagcttgaacagcgtgcctcaatatactttcggatg
agttctgaacacacaatgaaggtggcagaagagctgtaccaagctggtttcatcagttat
cctcgtacggaaactgatggcttctctgaaaggacggatttgcgtgcaattgtggaagaa
caacaaaggcatcctggatggggatcatatgctcaacgattgttggacccagcatctggg
ctttggaaaaaccctagcaatggtggacatgatgacaaggcccatccacctatccacccc
actaaattttcttctggagaatcaggatggagtcaagatcaccatagattgtatgagctg
gttgttcgccatttcctggcatgtgtctcacagccagctgtaggggcagaaaccactgtt
gagattgatattgctggtgaattgttctctgcttcagggagagttatactagcaaaaaat
tacttagacgtttatcgatttgaatcatggggaggttcgttgctaccaacatatgaatat
ggacaacagtttgtcccaacaacattaactcttgattcgggagtcactaggcctccacca
cttttaagtgaagctgatttgctgagttgtatggacaaggagggcattggcacagatgca
acgatgcatgatcacataaaaaagctgctggatcgattttatgcaaccaaggactcaagc
atgcgtttctcaccgaccaatcttggcgaagcgttggtgatgggatatgatgacatgggg
tataaactgtggaaaccataccttagagctgttatggagcgtgacatgaaagctgttagt
gaaggtgctaagagcaaagctgaagttttggaaacttgcttgcagcaaatgaaagcttgc
ttcctagatgcaaggttgaacaaagtaaaactctttgaagccatgtcagtattctttgag
agatctggcaggcctagtggggatgatcagcacacatctggagagttcattcggcgatgt
ggactgtgccatgaagcagatatggtacttagacaaaaccgggatggaaatttcatggtt
ggatgcttgggttatcctcagtgtaggaatgctgtctggctccctggatctgtatcagaa
gctgctgtaacaactaacgtttgcaactcatgcacgccaggtcctgtttacttgattcaa
tttacatttcggcggctagaaataccaccaaactatagtgccaaccatttgggttgcatt
ggcggctgtgatgagactcttagacagttgacggaaatctgtggaactggttctcggtta
tcagcaagagggcgtgggccagcgacatccaacaataatgtcccacgaagtaataccagg
cagggtccttgcatatattgtcatcaagcagggcattcttcaggcgattgcccttcccaa
tcttcaggtcctcgaagggtgaggcctcaatctatgaatgttcaaagtgcaagagggggt
ggaccagcaatgtccaacaatgtccaacgaagtaatactaggcagggtgcttgcatatac
tgtcatcaaacgggtcattcttcaggcgattgcccttcccaatcttcaggtccgcaaagt
gcaaggcctcgacctatgaatgtacaaagtggacaagtatcaatctcatgttctacgtgt
ggtgcaccatgtgctttacgaacagctaatacaacagctaacagaggaagaaaattctac
tcttgtcaatcgcaggcgtgcaacttttttgtatgggaggatagcctcaacaatgataac
ggaggaagaggttttcagcgtgcaaatgttagtgcctcagcatctaaccccactcggaat
ggtggcagcggtagaggtggccggggtgcaggagatgctgctggggtgagttttgtatca
gcgactggtgatcccgtctccggtagaaggtgttttgcttgcggagatccatcacacttc
gcaaatgtttgcccgaaccgtggtaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system