KEGG   Malus domestica (apple): 103435807Help
Entry
103435807         CDS       T03194                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
mdm04141  Protein processing in endoplasmic reticulum
mdm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103435807
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103435807
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103435807
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    103435807
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103435807
   03009 Ribosome biogenesis [BR:mdm03009]
    103435807
   03110 Chaperones and folding catalysts [BR:mdm03110]
    103435807
   04131 Membrane trafficking [BR:mdm04131]
    103435807
   03051 Proteasome [BR:mdm03051]
    103435807
   03029 Mitochondrial biogenesis [BR:mdm03029]
    103435807
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103435807
Protein phosphatases and associated proteins [BR:mdm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     103435807
Spliceosome [BR:mdm03041]
 Complex B
  Other components
   Prp19 complex
    103435807
 Complex C
   Prp19-CDC5 complex
    103435807
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    103435807
Chaperones and folding catalysts [BR:mdm03110]
 Heat shock proteins
  HSP70 / DNAK
   103435807
Membrane trafficking [BR:mdm04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    103435807
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    103435807
Proteasome [BR:mdm03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    103435807
Mitochondrial biogenesis [BR:mdm03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    103435807
Exosome [BR:mdm04147]
 Exosomal proteins
  Proteins found in most exosomes
   103435807
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70
Motif
Other DBs
NCBI-GeneID: 103435807
NCBI-ProteinID: XP_028962122
Position
1
AA seq 180 aa AA seqDB search
MDILKSIDPVEKCLRDAKMNITSVHDVVVSGGSSRIPKCSSLLQEVFKGKELCKGINPDE
AVANGAGVHAAVLCGNGTGKLQDFTLLNATPLTFGMETLGKHVMGVVIPRSMRVTMEKKT
TLVTICDNQRTITFPIYEGESKTLFWVNLNSMTFLQLPRMFLNSTFALKLIQMVCPGCLC
NT seq 543 nt NT seq  +upstreamnt  +downstreamnt
atggatatccttaagagtatagatcctgtggagaagtgtttgagggatgctaaaatgaac
ataaccagtgtccatgacgttgttgtttctggtggctcttctagaattcccaaatgcagc
agcttgttacaggaggttttcaagggaaaggagctttgcaagggcatcaatccggatgaa
gcggtggccaacggggccggtgttcatgctgctgtcttgtgtgggaatggaactgggaag
cttcaagatttcactttattgaatgccacccccttaacatttgggatggagactttagga
aaacatgtcatgggagttgttattccaagaagcatgagagttaccatggagaagaagacg
actttagttactatatgtgataaccaacgtaccatcaccttccccatttatgagggagag
agcaaaacactcttttgggtgaatttaaactccatgacattcctccagctcccaaggatg
ttcctaaattcgacgtttgctttgaaattgatccaaatggtgtgtcctggctgtctctgc
tga

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