KEGG   Malus domestica (apple): 103437582
Entry
103437582         CDS       T03194                                 
Name
(RefSeq) RNA pseudouridine synthase 7-like isoform X1
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103437582
Enzymes [BR:mdm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     103437582
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    103437582
SSDB
Motif
Pfam: PseudoU_synth_2 PPP1R21_C
Other DBs
NCBI-GeneID: 103437582
NCBI-ProteinID: XP_028959648
Position
6:complement(28252022..28263803)
AA seq 421 aa
MKSRKEEKAMEIVWQTPEIRPQRQDYIFRDGRRHVRPYNFEFICHVKKRWAGKTIVDLFT
YEFKGRPYDYYVSAVKSGRIQVEGVMVPVSYIVKTSQKISHFVHRHEPPVMTCDVSILQE
EPDVVVVCKPASVPVHSCGQYRKNTVVGILEAEHGLAPLFRILSFKHYTFGITYFNIMIF
CSEILYILYYTFLDMIMLAIHRLDRLVSGLLILAKSSSKANYFRQQIEGGMVQKQYIARV
AGEFPEQEQLVDANVIHDPRECRSTAEVSDLSDDTLIKGKTACTKFTRLSTNGIHSLVLC
EPVTGRTHQIRVHLQHVGYPIANDMLYLSKHVNGRSTEGMGADRAAVNSRPLLTSGFCEN
LSTEHVDPNEDFSIDPMCTNCPNLVPKGYDVHEEALWLHCVRYSAPGWTYECPYPDWASL
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagagtagaaaggaagagaaggccatggagatcgtgtggcagactccggagattcgg
ccgcaacggcaagattacatctttcgcgatgggaggcgccatgtcagaccctacaacttc
gagttcatctgtcatgtgaagaaacggtgggcggggaagaccatcgttgacttgttcacc
tatgagttcaaaggccggccttatgattactatgttagtgcagtgaaatctggaaggata
caggttgagggagtgatggtgccggtttcctacattgttaaaacgtcgcaaaagataagc
cacttcgtccacaggcatgagccgccagtgatgacttgtgatgtatcaattctccaagaa
gaaccggatgtggttgtcgtttgtaaacctgcatctgttccggtgcattcatgtggtcaa
tatcgtaagaacaccgttgttgggatccttgaggctgagcatggcttggcacctctattc
cgtatcctaagctttaaacattatacttttggcatcacgtattttaacataatgatattt
tgcagtgaaatcttatatattctttattatactttccttgacatgatcatgctagcgatt
catcgactagatcgccttgtctcaggactccttatcttggccaaaagttcttcaaaagcc
aactactttaggcaacagattgaaggagggatggtccagaaacagtacattgcaagagtt
gctggagaatttcctgagcaagagcaacttgtagatgctaacgttattcatgatcctcga
gaatgtaggagcacagcagaggttagtgatttatctgatgatacgctcatcaaggggaag
actgcctgtacaaagtttactagactcagtaccaatggaattcacagtcttgtcttgtgt
gaaccagtcactggccgaactcatcaaatacgtgtccatttgcaacatgtaggctatccg
atagccaatgacatgctttacctgtccaaacatgttaatggtcgttcaactgaaggaatg
ggtgctgatagagccgctgtaaattccaggccccttctgacctctgggttttgtgaaaat
ttatccactgaacatgtagaccccaatgaagattttagcattgatcccatgtgtacaaat
tgtccgaatttggttccaaaaggatacgatgttcatgaagaggctttgtggctgcactgt
gttcgatattctgcacccggatggacttatgaatgcccgtatccggattgggcatcactc
agctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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