KEGG   Malus domestica (apple): 103438009
Entry
103438009         CDS       T03194                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
mdm  Malus domestica (apple)
Pathway
mdm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103438009
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mdm01002]
    103438009
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103438009
   04121 Ubiquitin system [BR:mdm04121]
    103438009
Enzymes [BR:mdm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103438009
Peptidases and inhibitors [BR:mdm01002]
 Metallo peptidases
  Family M67
   103438009
Membrane trafficking [BR:mdm04131]
 Endosome - Lysosome transport
  Others
   Others
    103438009
Ubiquitin system [BR:mdm04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    103438009
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 103438009
NCBI-ProteinID: XP_008374766
UniProt: A0A498JNB3
Position
6:35065146..35070173
AA seq 529 aa
MRSSSSSDRINIAASAQRLDVDNRIPLRIYFRIANNILKQADIFRQEKNIIDLYIMLLRF
SSLVSETIPHHRDYRASIQGEKVFLKTKLFDALNELEELKPAVKQKLKPAMKHKNDEFNR
INGKFNDGWSHNNQIDFVVSPLKKQSLISYDATKAARPAARELVYQPPRSQQFSYARPLE
GQFRKLSIVPRPNEETLSRHSILGPNGLNGQWQPPRSDIGVRYPSILDLTPVEIPRENSV
GQSIEDEHTIKKDEKTDIKDASDLEPERSSLEPILTQTTDGGQKDFTEELCSLISFESTK
TPGHTKLIRQPSPPPVLAEVQDLIPAVSPQVSEVECGLETLSSDELLRAESPLQLHISTT
MMEHFMKLAKSNTDKSLETCGILGGSLKNRKFYVTALIIPKQESTANSCQATNEEEIFEV
QDKQSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPEAVAIVMAPQGGSRTHGIFRLT
NPGGMSVIRQCQHRGFHPHDQPPDGGPIYKTCADVYMNPNLKFDVIDLR
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgaggtcgtcgtcttcctccgataggattaacattgccgcgagtgcccagcgactcgat
gtcgacaatcggattcctctgcgtatctactttcggatcgccaataatatcctcaagcag
gctgacatttttcgacaagagaagaatattatagacctatatattatgctactaaggttt
tcaagtttggtctctgagacaataccgcatcatcgagactatagagcatctattcaagga
gagaaggttttcttgaaaacgaaattgtttgatgctctgaatgagctcgaggagctcaag
ccagcagtgaaacagaagcttaagccagccatgaaacataagaacgatgaatttaacaga
ataaatggaaaatttaacgacgggtggagccataataaccagattgattttgtggtttct
cctctcaagaagcaatcattgataagctatgatgcaaccaaggcagcaagaccagctgca
agagaacttgtctatcaacctccgaggtctcaacaattttcctatgccaggcctttggag
ggtcaatttcgcaaactatccatagttccacgtccaaatgaggaaactctttccagacat
tctattttgggcccaaatggccttaatggacagtggcagccacctagaagtgatataggg
gttcgctatccaagtatattagacttaactcctgttgaaattccaagggaaaacagtgtg
ggacagtccatagaagatgaacatacaattaaaaaagacgaaaagacagatataaaggat
gctagcgacttggaacctgaaaggtcaagtttggaaccaattcttacccagactactgat
ggtggccagaaggattttacagaggaactttgctcccttatttctttcgaatcaacaaaa
actcctggtcatacaaaacttatcagacagccttctcctcctcctgttcttgcggaagta
caagacttgattccagcagtttcacctcaagtgtctgaggtagaatgtggactagagact
ctctcatcggatgaacttcttcgtgctgaatctcccctgcaattacacatttcaacgaca
atgatggagcatttcatgaagctggctaagtcaaatactgataagagcttggagacgtgt
ggcatcctaggaggctcactaaaaaacagaaagttttatgttacagctctcatcatacct
aagcaggagtcaactgcgaattcgtgtcaggccacgaatgaagaggaaatatttgaagtt
caggataaacaatctctctttcctcttggctggatacatacgcatcctacgcagtcttgt
ttcatgtcgtcgattgatctccatacccattattcatatcagattatgttgccggaagct
gttgcaattgtcatggcaccacaaggtggctcaagaacccatggcattttccgattgaca
aacccaggtggtatgtcggtcattagacagtgccagcaccgtggttttcatccacatgat
caaccacctgatggtggacccatttacaagacctgtgcagatgtttatatgaaccccaat
ctaaagtttgacgttattgatcttcgatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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