KEGG   Malus domestica (apple): 103448000
Entry
103448000         CDS       T03194                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103448000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103448000
Spliceosome [BR:mdm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103448000
 Complex B
    103448000
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 103448000
NCBI-ProteinID: XP_008385457
Position
11:14966670..14970107
AA seq 310 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
GVDAQGQPIDPRQMQRHFEEFYEDLYQELSKYGDIESLNVCDNLADHMVGNVYVQFREED
HAANALRNLSGRFYAGRPIIVDYSPVTNFREATCRQYEENTCNRGGYCNFMHLKRIGREL
RRELFGSYRRRHSHSRSRSRSPYRHRSYEERSHGSRALSRRYDDDDRYPESWSRRNKTLS
PGRKRGRSRSRSPGRRRNHSPVREGSEERRAKIEQWNREKEQNENASRVNTDRSDNDGHA
HMENQYNGHE
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgatattcgggacggagaaggaccgagtgaactgccctttc
tacttcaaaattggggcttgcaggcacggcgaccgctgctccagactccacaccaagccc
agcgtcagccccacgctcctgctctccaacatgtaccagcggcccgatatgatcaccccc
ggcgtcgacgcccagggccagcccatcgacccccgccagatgcaaaggcacttcgaggag
ttttatgaggatctatatcaggagttgagtaagtatggcgacattgaaagtctgaatgtc
tgtgacaacctagccgaccacatggtgggcaatgtgtacgttcagtttagggaggaagat
cacgctgcaaatgcacttcggaacctgagtggaagattttatgctggtcgtcctatcatt
gttgactattcaccagtgacaaacttccgtgaagccacctgcaggcaatatgaggagaat
acatgcaaccgtggtggatactgcaattttatgcacctgaaaaggattggcagggaattg
aggcgtgaattatttggaagctatcggagaaggcacagccacagtcgaagtaggagtcgc
agcccttacaggcatcgtagttacgaagagcgctctcatgggagccgtgctcttagcaga
aggtatgatgatgatgatcgttatcctgaaagctggagccggaggaacaagactctaagc
cctggtcgaaagagaggacgcagtagaagtagaagccctggaagaagaagaaaccacagt
ccagttagagaaggaagtgaggagagacgggccaaaattgagcagtggaatagggaaaaa
gaacagaatgaaaatgctagtagggtcaacactgacagaagcgacaatgatgggcatgca
catatggaaaatcagtacaatggccatgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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