KEGG   Malus domestica (apple): 103451187
Entry
103451187         CDS       T03194                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103451187
   04121 Ubiquitin system [BR:mdm04121]
    103451187
Enzymes [BR:mdm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103451187
Membrane trafficking [BR:mdm04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    103451187
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103451187
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-ANAPC11 zf-RING_5 zf-Nse zf-C3HC4_3 DUF4234 FANCL_C Rad50_zn_hook
Other DBs
NCBI-GeneID: 103451187
NCBI-ProteinID: XP_008388847
Position
8:complement(19780682..19783308)
AA seq 335 aa
MSLSPPRLRDINNDDGTTPLYGLYWCYHCNRTVRTASNNPSETVCPRCFGQFLSEFDMSI
RPRLLVDYTSFDPSPEARLLEALSLMFDPLMRPFNRELYDPEADSRGRPWYWRRHLGHEG
RGAGVEPDVQDLRTNRRRRRRNPSFDGRENWEVESEPRTRSRPRNLIIVRPVEDPSNPVG
PTHRPQENLVLPAPRGVDLGNYFFGPGLHGLIEELTQNDRPGPPPVPEMAINAIPTVKIS
EVHLSNESCCPICMEEFKIGGEVRELSCNHIYHSDCIVPWLRLHNSCPVCRVEIQVCGGG
LVELGGSNSGGEGRTRRRVRWSRLGSLWPFRSRHR
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgtctctgagtccacctcgtttgagggacattaacaatgacgatggcacaacaccacta
tacggactctactggtgctaccattgcaatcggacggtgaggactgcctccaacaaccca
tcagagacagtctgccctcgttgtttcgggcagtttctgtcggagtttgacatgtcgatt
agacctagacttctcgtagactacaccagtttcgatccatccccggaagctcgtctgctc
gaagcactttccctcatgttcgatccgctcatgaggcctttcaaccgtgaattatatgac
ccggaagccgattccagaggacgtccatggtattggcgacgccaccttggccatgagggc
agaggtgcaggtgtagaacctgatgttcaagatttgaggacaaataggagacggaggcgg
cgcaaccctagctttgatggtagagaaaactgggaggttgaatctgagccccgcactcga
agccgtcccaggaatttgattatagtccgacccgtggaagacccttctaatccagtggga
cccactcatagaccacaagaaaatctagtactacccgctccacgtggagtcgatctagga
aactacttttttgggccgggccttcacggactgatcgaagaactaacccaaaacgacagg
cccggcccgcctccagtacccgaaatggcaatcaacgcaataccaactgtgaaaatcagc
gaggtccatttgagcaatgagtcttgttgcccaatttgcatggaggagtttaagattggt
ggagaggtgagggagttgtcatgcaatcacatataccacagcgattgtattgttccgtgg
ctgaggctccacaactcttgcccggtttgccgggttgagattcaggtatgcggtggcgga
ttggtagagttggggggctcgaatagtggcggagaggggcggacaagacggcgcgtgagg
tggagtaggttgggatctttgtggccatttcgatcaaggcatcgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (26)   

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