KEGG   Malus domestica (apple): 103452217
Entry
103452217         CDS       T03194                                 
Name
(RefSeq) LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At2g02150
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103452217
   03029 Mitochondrial biogenesis [BR:mdm03029]
    103452217
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    103452217
Mitochondrial biogenesis [BR:mdm03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    103452217
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27 ATP13 ENCP4
Other DBs
NCBI-GeneID: 103452217
NCBI-ProteinID: XP_008389961
Position
13:633972..637601
AA seq 796 aa
MELTEAAALVFFSSLFFFISFFSEMLLFLRNLFRTGCRASSSASSRVSLLSSIPQYPSNC
RFINLSSLTSSSSHATSLIACPFVWFTGFLCIFRFPFVTKSQPSSFPESLNTDSLSRIVX
HDYWDDPRIVNLFDSALAPIWVSRFLVELKGDPKLALKLFKWAKTQIGFRHTTESYCILV
HILFFARMYVDAHEVLRELVLLSRALPGCDVFDVLWWTRNVCRVGFGVFDALFGVLVEVG
MLEEASECFLRMKKFRVLPKVRSCNALLHRLSKPGKGNLSRKFFKDMLGAGINPSVFTYN
IMIGYMCKEGDLDTASCLFAQMKRMGLTPDVVTYNSLIDGYGKVGLLDDSVCIFEEMKDA
DCEPDTITFNSLINCCCKFDRMPQALNFLCEMNNNGLKPNVITYSTLIDAFCKEGMMQEA
VKIFMDMKRVGLLPNEFTYTSLIDANCKSGNLSEALKLKSEMLQAGISWNIVTYTALLDG
LCEDGRMDEAEEVFREVQKSGIIPNQQICTALLHGYIKAKKIENAMEIWNEIKGKGFKPD
LLLYGTIIWGLCSQNKLEESELVLKEMTGYGLTANHFIYTTLMDAYYKAGKTEAALNLVQ
EMRDNGIELTVVTYCALIDGLCKKGLFQEATSHFRTMPDLGLQPNVAVFTALIDGLCKNN
CIEAAKELFKEMVDKGLIPDKAAYTTLMDGNLKHGNLEEALSIQNRMREIGMELDLYAYT
SLIWGLSEFGQVKQAKMLLDEMIGKGILPDEILCISLLRKYYKLGNLDEAIELQIEMVNR
GLISGTCDHVIPNAGT
NT seq 2391 nt   +upstreamnt  +downstreamnt
atggagctcactgaagccgccgctctcgttttcttctcctctttatttttcttcatctcc
ttcttctcagagatgctgctgtttcttcgcaatctcttccgaacgggttgcagagcctcc
tcctccgcatcgtctcgagtaagccttctctcttcgattcctcagtacccatctaattgc
cgttttatcaatttatcttctttaacttcatcatcatcgcatgctacttctcttatagct
tgcccatttgtttggttcaccggtttcttatgcatttttcgcttcccgtttgtcaccaaa
tcccaacccagttcgttccccgaaagtttaaataccgattctttgagtagaattgtcnaa
cacgattactgggatgatcccagaattgtaaacttgtttgattcggcattggcgccgatt
tgggtgtccaggtttttggtggaactgaagggtgatcccaagttggcgttgaaattgttc
aagtgggcaaaaacccaaattgggtttcgccacactactgagtcttattgtattttggtt
cacatactgttttttgctagaatgtatgtcgatgcccatgaagttcttagagagttggtc
ttgttgagccgggcattgccaggttgtgatgtgtttgatgtgttgtggtggacgaggaat
gtttgtcgtgtgggatttggagtgtttgatgcattgtttggtgttttggttgaggttgga
atgcttgaggaagcaagtgaatgcttcttgaggatgaagaagtttagagttttgccaaaa
gtgcggtcttgtaatgcgcttttgcataggttatcaaagccggggaagggcaatttgtca
aggaagttttttaaggatatgcttggggctgggattaatccatcagttttcacatacaat
ataatgattggttatatgtgcaaagaaggcgatttggatactgctagttgcttatttgca
caaatgaaacggatgggccttacacctgatgttgtgacatataattctctcattgatgga
tatgggaaggttggactattagatgattcggtttgcatatttgaagaaatgaaggatgca
gattgtgaacctgacacaataaccttcaattctttgattaattgttgttgtaaatttgat
agaatgccccaagctttgaattttctctgtgagatgaataataatgggttgaagccaaat
gtgataacttatagcactttaattgatgccttctgcaaggaagggatgatgcaagaggca
gtcaagatttttatggacatgaaacgagttggtcttttacctaatgagttcacctatact
tcattgattgatgcgaattgtaaatctgggaatttgagtgaagcactgaagctgaaaagt
gagatgttacaggcagggattagctggaacattgtaacctatacagctctacttgacggg
ctatgtgaagacgggaggatggacgaagcagaagaagtctttagggaagtgcagaaatct
ggaataattcctaaccagcaaatatgtactgcccttcttcatggatatattaaagctaag
aagatagaaaatgctatggaaatttggaatgaaattaaggggaaaggctttaaaccagat
ttgttactctacggaaccatcatttggggtctttgctcccaaaataagcttgaagagtct
gagcttgtgctcaaggaaatgacgggttatggattaactgcaaatcatttcatttacaca
acacttatggatgcttattacaaagccggaaaaactgaggcggcgcttaatcttgtacaa
gaaatgcgagacaatggtattgagctcactgttgtaacatattgtgcattaattgatggt
ttgtgcaaaaagggattgttccaagaggcaaccagtcattttaggacaatgcccgacctt
ggtttgcaacccaatgtagcagtttttacagccttaattgatggtctttgtaaaaataat
tgcattgaagcagctaaggagctctttaaggaaatggtagataagggtttgattccggat
aaagctgcttacaccactctaatggatggaaacttaaagcatggaaatcttgaagaagcc
ttgagcattcaaaataggatgagagaaatcggtatggaacttgatctgtatgcatatact
tccttgatttgggggctttctgagtttggccaggtgaaacaagcaaaaatgttgcttgat
gagatgattgggaaaggtatccttcctgacgagattctctgcattagtctgctaagaaag
tactataagctagggaatctggatgaagccatcgagttgcagattgaaatggtaaacagg
ggtctaatatctggaacttgtgatcacgtgattcctaatgcaggaacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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