KEGG   Malus domestica (apple): 103452618
Entry
103452618         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein LOC103452618 isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103452618
Enzymes [BR:mdm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     103452618
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    103452618
 Prokaryotic type
    103452618
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 103452618
NCBI-ProteinID: XP_008390354
Position
13:10836899..10840155
AA seq 333 aa
MGSHAVVVGLPSPPNRNGSLSPPIPTTSISSSKKKDGIGEQMARKQTGDGGYKWRLVIAY
DGTRYAGWQYQSSPPTIQCFVENALMGATKLERKDLHFVGASRTDKGVHAWGQVAHFVTP
FNYDSIESIHAALNGLLPDDIRVREISPAVPEFHARFSARSKIYHYKIYNDTFMDPFQRH
YAYHSAHKLNAAVMREASKYFIGKHDFSAFVNASQKERVRDPVKDIFRFEVIEMGALLQL
EVEGSGFLYRQVRNMVALLIQIGREALPPDIVPKLLATRDRRALAKYTMFTPPHGLCLVT
VKYNEEHLRLPSSCSTTSFGRHYTIGSCKLPFY
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgggtagtcatgcagttgtagtaggccttccttctcctccaaatcgtaacggctctctc
tctcctccaattcccacaacttctataagcagctcgaagaaaaaggatggaattggagag
caaatggcaaggaagcagacaggggatggtgggtacaagtggcgtttggtgattgcttat
gacggcacccgttatgcaggatggcaataccagagttcaccgcctacaatacagtgcttt
gtggagaatgctctaatgggcgcaacaaagctggaaaggaaggatcttcatttcgttggt
gcaagtaggacagataaaggagtacatgcctggggtcaggttgcacactttgtcacacct
ttcaactatgacagcattgaaagcattcatgctgctcttaacggtcttcttcctgatgat
atccgagttagggagatcagccctgcagtgcctgaattccatgctcgtttttcagcgaga
agcaagatttatcattacaaaatatataacgacacattcatggatccatttcagcgtcac
tatgcttaccatagtgctcataagctaaacgccgctgttatgcgagaagcttcaaagtat
tttattggaaagcatgatttctctgcttttgtcaatgcctcccagaaggaacgagtgcgt
gatccagtgaaggatatattccgttttgaggtcattgaaatgggagctcttttacagcta
gaagttgaaggctccggcttcttatacagacaagtccggaacatggttgctctgctgatt
caaattggaagggaagcgcttcctcctgatattgttcccaagctattggcaacacgagat
cgtagggcgcttgccaaatataccatgtttactccacctcatgggctttgtctcgtgacg
gtcaagtataacgaggagcatctacggcttccatccagttgctccacaaccagttttggt
aggcattatactatcggctcatgtaagcttccattctactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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