KEGG   Malus domestica (apple): 103456226
Entry
103456226         CDS       T03194                                 
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
mdm  Malus domestica (apple)
Pathway
mdm00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    103456226
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mdm01007]
    103456226
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103456226
Enzymes [BR:mdm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     103456226
Amino acid related enzymes [BR:mdm01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   103456226
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    103456226
 Prokaryotic type
    103456226
SSDB
Motif
Pfam: tRNA-synt_1e tRNA-synt_1g tRNA-synt_1 DALR_2 tRNA-synt_1f
Other DBs
NCBI-GeneID: 103456226
NCBI-ProteinID: XP_008394123
Position
15:complement(9304221..9307734)
AA seq 563 aa
MSTLLRFYRPLFPYSTRKIQLGTQRFHSLLKPNRRIRCVATSSHSQPSIVGGGGSKPESP
ESSELWLHNTMSRKKELFRPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHL
GYQVTYVRNFTDVDDKIIARANELREDPISLSRRYCEEFNQDMTCLHCLPPSVEPRVSDH
MPQILDMIKQIIENGYGYSVDGDVYFSVDKFPDYGRLSGRKLEDNRAGERVAIDSRKKHP
GDFAMWKSAKEGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENE
IAQSCAACNHSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHY
QSPINYSDALLESASDRIFYIYQALHDCESALSQNNGVTLKDTIPPDTLNSINNFYNIFV
TSMSDDLHTPVVLAALSDPLKTINDLLHTRKGKRQELRMESLAALGKIIKNVLSILGLMP
ASYPEILQELKDKALKRAKLTEDQVLQKIEERNAARKNKEYERSDTIRRDLAAVGIALMD
SPDGTTWRPAVPLAIQEQQVATT
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgagcactctgctcaggttctacagacccttgttcccatactcgactcggaagattcaa
ctcggaacgcagcgtttccacagcttattgaagcccaataggagaattcgctgcgtggct
acttccagccactctcagccgtctattgtaggcggcggcggcagtaaaccggagagtcca
gaatcgtcggagctatggcttcacaacacaatgagcaggaagaaggagcttttcaggccc
aaaattgaagggaaggtgggcatgtatgtgtgcggagtcacagcctatgatctcagccac
atcggccatgcgcgcgtctacgtcacattcgatgttctctacagatatcttaggcatttg
ggatatcaagtcacatacgttcggaatttcacagatgttgatgacaaaataattgctaga
gcaaatgagttgagggaggatcctatcagcttgagcaggcgctactgcgaggagttcaat
caagatatgacctgtctgcattgcctgcctccttcggtggaaccacgagtgtccgatcac
atgccacagatccttgatatgataaagcagattattgaaaatggatatgggtacagtgtt
gatggggatgtttactttagtgttgacaagttcccagattatgggcgtctatctgggcga
aagttagaagataatcgagctggtgagcgggttgctattgattcaaggaaaaaacatcct
ggtgactttgccatgtggaagtctgcaaaggaaggagaacccttctgggacagtccatgg
ggccctggtagacccggctggcatatcgagtgcagtgcaatgagtgctgcttatctgggt
tactctttcgacatacatggtggagggatggaccttgtgtttccccaccatgaaaatgaa
attgcacagagttgtgctgcatgtaaccacagtaacataagctactggatacacaatggt
tttgtcaccattgactcagagaaaatgtccaaatcccttggaaacttcttcacaattcgg
caggttatagacctctaccatccattggctttgcgacttttcttgttagggacccactat
cagtctccgatcaactactctgatgcgctgcttgaaagtgcttcagaccggattttctac
atttatcaggcattacatgattgtgaaagtgctctgagccagaataatggggtaaccctg
aaagataccatccctcctgatacactgaacagcatcaataacttctataacattttcgta
acgtcaatgtcagatgatcttcacactcctgttgttttggctgcactatcagacccatta
aaaactatcaatgatctgctacatactcgtaaggggaagaggcaagaactgcggatggag
tcgctggcagctttgggaaagataattaagaatgttttgagcattttaggactgatgcct
gcaagctacccggagattctgcaggagctgaaggataaagccttgaagcgtgcaaagtta
accgaagatcaagtattgcaaaaaatcgaggaaagaaatgcagcgaggaagaacaaagag
tatgaaagatcagatacaattagaagagatttagctgccgtggggattgctcttatggac
agcccagatggaacgacgtggagacctgccgtacctcttgcaattcaagagcagcaggtt
gcaactacttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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