KEGG   Malus domestica (apple): 114820158
Entry
114820158         CDS       T03194                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12-like
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
mdm  Malus domestica (apple)
Pathway
mdm03020  RNA polymerase
mdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114820158
  09124 Replication and repair
   03420 Nucleotide excision repair
    114820158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    114820158
   03400 DNA repair and recombination proteins [BR:mdm03400]
    114820158
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     114820158
  RNA polymerase III system
   RNA polymerase III
     114820158
  RNA polymerase I system
   RNA polymerase I
     114820158
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114820158
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon zinc_ribbon_13 DUF5816 LysW-like_globular HypA DZR Fin C1_1 Zn-ribbon_8 DUF1451 SHLD2_C TF_Zn_Ribbon ZnF_RZ-type
Other DBs
NCBI-GeneID: 114820158
NCBI-ProteinID: XP_028946393
Position
12:complement(9423884..9426042)
AA seq 52 aa
MDPPPPEAVYYICGDCGMEVQLKSNDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggatcctccgccgccagaggccgtctactacatctgtggagattgtgggatggaggtg
cagctgaaatccaacgacgtgattcagtgccgcgagtgcggttaccgtatcttatacaag
aagcgtactcgccgcattgttcagtatgaggcacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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