KEGG   Methylomonas denitrificans: JT25_012385
Entry
JT25_012385       CDS       T04191                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mdn  Methylomonas denitrificans
Pathway
mdn00300  Lysine biosynthesis
mdn00470  D-Amino acid metabolism
mdn01100  Metabolic pathways
mdn01110  Biosynthesis of secondary metabolites
mdn01120  Microbial metabolism in diverse environments
mdn01230  Biosynthesis of amino acids
Module
mdn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mdn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    JT25_012385 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JT25_012385 (dapF)
Enzymes [BR:mdn01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     JT25_012385 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AMK77270
UniProt: A0A126T5E2
Position
2701236..2702063
AA seq 275 aa
MINFTKMQGLGNDFVVIDAINQQIQLTTAQIRFLADRHFGVGCDQLLLVERPISDNAEFK
YRIFNADGSEVAQCGNGARCFARFVRDKGLSKKDEIIVDTDARQLTLRFAAGDLVTVEMG
VPALEPKQIPLNVSEQSKLYKVKLAETEVEFAAVSMGNPHAVIRVDDVANAPVLSIGARL
ECHELFPERANIGFMQIVNRRQIKLRVYERGAAETLACGSGACAAVVAGIEQGLLDQDVQ
VQLPGGELIISWIGSGHPVLMTGAATTVFEGQIKL
NT seq 828 nt   +upstreamnt  +downstreamnt
ataattaatttcaccaaaatgcaggggctgggaaatgattttgtcgtgatcgacgctata
aaccagcaaatacaattgacgaccgcacagattcggtttttggcggatcgccattttggc
gtgggctgcgatcagttgttgttggtggaaaggcctatcagcgacaacgccgagtttaag
tataggatctttaatgctgacggcagcgaagttgctcagtgcgggaacggggcgcgttgc
tttgctcgctttgtgcgcgacaaaggcttaagtaagaaagatgaaattattgtcgatacc
gacgctagacagctgacactgcggtttgctgcgggagatttggtcaccgttgaaatgggc
gtccccgcacttgagcctaagcaaataccgctgaatgtttccgagcagtccaagctgtat
aaagtaaagttggcggaaaccgaagttgaattcgcggctgtatccatgggtaatccgcat
gcggttatccgggtcgatgatgtggcgaacgcaccagttttatctatcggagctaggttg
gagtgtcatgagctgtttccggagcgagccaatattggtttcatgcaaattgttaatcgt
cgacaaattaaattacgcgtttacgagcggggcgcagcagaaacgttggcatgcggtagc
ggggcttgtgccgctgttgtggcaggtatcgagcaaggtttgttggatcaggatgtccag
gttcaattgcctggcggggaattaattattagctggattggtagcggtcacccggtgttg
atgacgggggcggctaccacggtattcgagggacaaataaagttatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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