KEGG   Methylomonas denitrificans: JT25_023180
Entry
JT25_023180       CDS       T04191                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
mdn  Methylomonas denitrificans
Pathway
mdn00300  Lysine biosynthesis
mdn00470  D-Amino acid metabolism
mdn01100  Metabolic pathways
mdn01110  Biosynthesis of secondary metabolites
mdn01120  Microbial metabolism in diverse environments
mdn01230  Biosynthesis of amino acids
Module
mdn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mdn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    JT25_023180
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JT25_023180
Enzymes [BR:mdn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     JT25_023180
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AMK79353
UniProt: A0A140E7H9
Position
5077511..5078737
AA seq 408 aa
MNRSLARVTEAVHLACTDEPLCAYIYDLAALDSHAAELAATLPSNCELFYAVKANSDLPI
LQTLAPYVRGFEVASGGELDWVRRHFPDTPVIFGGPGKLDTELAAALEQDVELLHVESLG
ELRRLAWLARSTDRQADVLLRINLALGGVPATTLTMGGRATPFGIDSGQLPQCLTWLARH
PEIRLHGFHFHLMSHQLDADAHLALLSRYFRQARQWREQFGLTINHLNVGGGIGINYREP
ERQFDWPAFSAGLTALVESENMQDWRIRFEPGRYLTAACGYYAMQVLDIKQCFGRHFAVG
RGGTHHFRTPYAQGHSHPFLVLPREHWPYPFPRPGVEQTEITVVGQLCTPKDVLATDAPV
GRLRVGDLLVFPYAGAYAWHISHHDFLRHLHPRHIYLSAQEPVHAANQ
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgaaccgatcgttagcgcgagtgacggaagccgttcatctcgcctgcaccgatgagccg
ctgtgcgcctatatctacgacttggcggcgctggatagccatgccgccgagttggccgca
acactgccgagcaattgcgaactcttttatgcggtcaaagcgaattccgacctgccgatc
ttgcaaacgctggcgccgtatgtgcgcggtttcgaggtcgcatccggcggcgaactggac
tgggtccgccgccatttccccgatacgccggtgattttcggcggtcccggcaagctggat
accgagctagccgccgcgttggagcaagacgtggaattgctgcacgttgaaagcctgggt
gaattgcggcggctggcctggctggcccgaagtacggacaggcaggccgatgtgctgctg
cgtatcaatcttgcgttgggcggtgtaccggccaccaccttgaccatgggcggccgggcc
accccgtttggtatcgattcaggccaactgccccaatgcctgacatggctggcacgacac
ccggaaatccgtttacatggcttccacttccacctgatgtcccaccaattggacgccgat
gcccatctggccttgctttcgcgttacttccgtcaggcgcggcaatggcgggagcaattc
gggctcactattaaccacctcaacgtgggcggcggcatcggcatcaattaccgcgaaccc
gagcggcaattcgactggccggcgttcagtgccggtttgacggcattggtcgagagcgaa
aacatgcaggactggcgcatccgcttcgaaccgggccgttacctgaccgcggcctgcggc
tattacgcgatgcaggtgctggacatcaagcaatgcttcggccgccatttcgcggtcgga
cgcggcggcacccaccatttccgcacaccctacgcccaaggccacagccatccgtttttg
gtattgccgcgcgaacactggccctatccgtttccccggcccggcgtcgaacagaccgaa
atcaccgtggtcggccagctctgcactccgaaagatgttttagccaccgacgcaccggtg
ggacggttgcgggtcggcgacctgctggtgtttccttatgccggcgcttatgcctggcat
atatcccaccacgactttctgcgccacctgcacccgcggcatatctatctatcagcgcag
gagccggttcatgctgcaaaccaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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