KEGG   Monodelphis domestica (gray short-tailed opossum): 100010874
Entry
100010874         CDS       T01031                                 
Symbol
DHX40
Name
(RefSeq) DEAH-box helicase 40
  KO
K18711  ATP-dependent RNA helicase DHX40 [EC:3.6.4.13]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdo03019]
    100010874 (DHX40)
Messenger RNA biogenesis [BR:mdo03019]
 Eukaryotic type
  mRNA processing factors
   Other processing factors
    100010874 (DHX40)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 AAA_19 nSTAND3 T2SSE AAA_30 Flavi_DEAD SLFN-g3_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 100010874
NCBI-ProteinID: XP_001364389
Ensembl: ENSMODG00000014468
UniProt: F7A5E9
Position
2:complement(172457440..172512022)
AA seq 767 aa
MAADREPVRSSQGRSAPISCHRRQRDKIQIPEEKKITYCDLPIKQQRRKLIQAVKDNPFL
IVTGRTGSGKTTQLPKYLYEAGFSKHGTIGVTQPRKVAAISVAQRVAEEMNCSLGNLVGY
QVRFDDCSSQDTAIKYMTDGCLLRHMMVDPDLTKFSVIILDEAHERTLTTDILFGLLKKL
FQEKSPTRKEHLKVVVMSATMELVGLSAFFGNCPVVDIPGKIFPVKEIFCDLIGPKDKEN
SSYVNAVVKVTLEIHLNELAGDILVFLTGQSEIERTCELLFQKAECIDYQYDVQDNSVDG
LLILPLYGAMPTEQQRRIFLPPPPGIRKCVVSTNISATSLTIDGIRYVVDGGFVKQLNHN
PRLGLDMLEVVPISKSEAMQRTGRAGRTSSGTCFRIYNQDFWNQCMPDYMIPEIKRTSLT
SVILTLKCLAIHDVIRFPYLERPDEKLILEALKHLYQCDAINRSGHVTKLGLSMAEFPLS
PNLTRAILKAAFWGCEDLLLPIAAMLSVENVFIRPGEAEKQKEAELRHQELSSQAGGFND
FATLAVIFEQCKSSTSPPTWCQRYWIHWRCLQSAFRVEGQLREIIRKLKQQPDFPRENYD
GPKHEILRRCLCTGYFTNVARRSVGRTFCTMDGHGTPIHIHPSSALYNQESKLEWIIFHD
VLVTSKMYVKTVCPIRYEWVKDLLPKLYQFDAYELSSMARHEVTEEEIKRWENKEDLKQQ
KDKAMKESLKKMQRRNDDKSILDARARFLERKHQRSQGITGTLKETD
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggctgcagacagggaaccggtcagaagctcacaagggagatctgctcccatcagctgt
catcggagacagagagacaagatacagattccagaagaaaagaaaattacttattgtgac
ctacctattaagcaacaaagaagaaaacttattcaggctgtgaaggacaacccatttctt
attgtgactggaaggacagggagtggtaaaactactcaactccctaaatatctttatgaa
gcaggattttcaaaacatggcaccattggggtgactcagccacgcaaagtagctgccata
tcagttgctcaaagagttgctgaagaaatgaactgttctttgggaaacttggtaggatac
caggtccgctttgatgattgtagctctcaggatacagcaatcaaatatatgactgatgga
tgtctgctaagacatatgatggttgacccggaccttaccaaattcagtgtcatcattttg
gatgaagcccatgagagaactctaacaacagacatcttatttggcttgctgaagaaattg
tttcaggagaaatcacccaccaggaaggagcatctgaaagtggtggtgatgtcagcaaca
atggagctggtggggctctcggccttctttggaaattgtccagtagtcgacattcctgga
aagatttttccagtcaaagagattttctgcgacttgattggcccaaaagacaaagaaaat
tcttcctatgttaatgcggttgtgaaagtgaccttagaaatccacctgaatgaattggct
ggagacatcttggtgtttctaacaggccagtcagaaattgagagaacttgtgaattactt
ttccagaaggcagaatgtattgattaccagtatgatgtgcaagacaactctgtagacggg
ctgctgatcttgccgttatatggagcgatgcccacagaacaacaaagaagaatatttttg
ccgccgccacctggcattaggaaatgtgttgtatctaccaatatttctgccacatcttta
acaatagatggaatcagatatgtggtagatggtggctttgtaaagcagttaaatcataac
cccagattagggttggatatgctggaggtggtgccaatctcaaagagtgaggcaatgcaa
cgaactggtcgagctggcagaacttcctctgggacttgctttcgaatctataatcaggat
ttctggaaccagtgcatgcctgactatatgatcccggaaattaaaagaactagtttaaca
tcagtgattttgaccttgaagtgccttgccatccatgatgtcataaggtttccctatttg
gaacggcctgatgagaaacttattttagaggctcttaaacatctctatcaatgcgatgca
atcaataggagtggccatgtgacaaaactgggtttatcaatggcagagtttcccctctct
ccaaatttgacccgggctatcctaaaagcagctttttggggttgtgaagatctcctgctt
ccaatagcagcaatgctgtctgtagaaaatgtcttcattcggcctggggaagcagagaaa
caaaaagaggcagagctgagacaccaggaactgtcgtcccaagctggtggattcaatgac
tttgcaactctagctgtaatctttgaacagtgcaaatcgagcacatctcctcctacctgg
tgtcagagatattggatccactggaggtgcttacaatctgcattccgtgtggaaggtcag
cttcgagagataatcaggaaactaaagcagcaacctgatttcccaagagaaaattatgat
ggacctaaacatgaaatcttacgaagatgtttgtgcactggctacttcaccaatgtagca
cgaagatctgtaggaagaacattttgcacaatggatgggcatggaaccccaatacacatt
catccttcttcagcgctctataatcaggaatccaaactcgaatggatcattttccatgat
gttttggttacttctaaaatgtatgtgaagactgtgtgcccaattcgctatgaatgggtt
aaagatttgctccccaaattatatcaatttgatgcctatgagttgagcagtatggcccgt
catgaagtgactgaggaagaaataaagagatgggaaaacaaggaagatctaaagcaacaa
aaagataaagcaatgaaggaatctctaaagaaaatgcagagaaggaacgatgataaatcc
attttggatgcacgtgctcgattcctggagagaaagcatcagcggtcccagggcatcaca
ggcactttgaaggaaactgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (13)   
   Pfam (13)   
All databases (40)   

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