KEGG   Monodelphis domestica (gray short-tailed opossum): 100013089
Entry
100013089         CDS       T01031                                 
Symbol
RNF40
Name
(RefSeq) ring finger protein 40
  KO
K10696  E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdo04121]
    100013089 (RNF40)
Enzymes [BR:mdo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100013089 (RNF40)
Ubiquitin system [BR:mdo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   BRE1 proteins
    100013089 (RNF40)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 BRE1 zf-RING_5 zf-RING_2 zf-RING_UBOX zf-rbx1
Other DBs
NCBI-GeneID: 100013089
NCBI-ProteinID: XP_007498569
Ensembl: ENSMODG00000001668
UniProt: F6SQS9
Position
6:85627950..85638493
AA seq 1014 aa
MSGAGNKRAAGDGGSGPSEKKQNREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEVLLRRHEGRGELLS
RAEDLGAQDVTEPDGTSLPEPGTTERRDLPTLQLRPLLSESALAFVAALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLHRRVEELCHRAQSRGECDTLGEGFRALTKDLGQDNRRL
QDLTTQLQEKHHRISLEYSELQDKVTSAETKVLEMETSVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSGSFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRSNERLKVALRSLPEEVVRETGEYRLLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQTMGSGTSAPSQTASEDQGS
GGGGTLTSVKEEESSGSGPAILQEIKKEAVSTPVIPTVSTASVVKKEEPTFEEELPLTQA
QASHPTPQTPASRSRETEPRGKREPRDREGPASGTPTSSSSSSSSRGDRDKAKAEESKRK
ESELLKGLRGELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRGRI
RDLEEKERKESKKLADEDALRRIRLAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFED
MQEQNGRLIQQLREKDDANFKLMSERIKSNQIHKLLREEKDELGEQVLGLKSQVDAQLLV
VQKLEEKERVLQGSLGSVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQSRLREI
QPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQKKVEVYADADEILQEEIKEYKARLT
CPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgtcgggggccggcaacaagcgcgcagccggagatggaggctcgggcccctcggagaaa
aagcagaatcgggaggagaagaccacgaccactctcatagagcccatccgtctgggaggc
atttcctccacggaggagatggacctaaaggtactgcagttcaagaacaagaagttggca
gagcgactggaacaacgacaggcctgtgaagatgaattaagggagcgaattgaaaagcta
gaaaagcgacaagccactgatgatgctacattgctcattgtcaaccgctattgggcccag
ctagatgaaactgtagaagtcctcctccgacggcatgagggacgaggagaattactctct
agggcagaggatctgggagcccaagatgtcactgaacctgatgggacttctctgcctgaa
ccaggaaccacagagagaagagatctccccaccctccagcttcgacccctattaagtgag
tcagctctggcttttgtggcagccctgggggccagcagtagcgaagaggtagaacttcag
ctccagggccgaatggagttctctaaggcagctgtgtccagagtagtggaggcttcagac
cgactgcatcgtcgagtagaagaactgtgtcatcgagcccaaagcagaggagagtgtgac
accctcggggaaggatttagggctttaaccaaggaccttggacaggacaacaggcgacta
caggatttgaccacacaactgcaggaaaagcaccaccgaatttctctggaatactctgag
cttcaagacaaggtgacatcagcagagaccaaggttctagagatggagacttcagtggag
gatctccagtgggacattgagaaacttagaaaacgagaacagaaactcaataagcacctt
gctgaagctctagagcagctcaattcgggctattatgtatcagggagttcagggagtttc
caagggggccaaatcacactcagtatgcaaaagtttgagatgctgaatgctgagctagaa
gagaaccaagagttggccaatagccgaatggcagagttagagaagcttcaggcggagcta
cagggtgctgtaaggagcaatgaacggctcaaggtggccttgcggagcctgcctgaggag
gtagtaagagagactggtgagtaccgactgctacaggctcagttctctctactctacaat
gaatccttgcaagtgaagacgcagcttgatgaagcaagggggctgcttctggctaccaag
aactcccatctgaggcacattgagcacatggagagtgatgagctgagcctacaaaaaaag
cttcgaacggaggtgattcagctagaggatacattagcccaggttcgaaaagagtatgag
atgctgcgaattgaatttgagcagaacctagcagccaacgagcaggcagggcccattaac
cgggagatgaggcacctgatcagcagcctgcagaaccacaaccaccagctgaagggtgat
gcccagcgatataaaaggaagctgagggaggtgcaggcagagatcggcaagcttcgggca
cagaccatgggctcaggcacttcagctccatcccaaactgcctctgaggatcagggatca
ggcggagggggaacactgacctcagtgaaagaagaggagagttctgggtcagggccagct
attctccaagagatcaaaaaagaggcagtctcaaccccagtgatccccacagtttccaca
gccagtgtggtgaagaaagaagagcccacttttgaggaggaattgcctctcactcaggcc
caagcctcacatcccacaccccaaacccctgcttccaggagccgggaaactgagcctcga
ggaaagcgagagccccgggaccgagaagggccagcatctgggaccccaacatcatcttcc
tcctcctcttcctcaaggggagatcgagacaaggccaaggctgaggaaagcaagaggaaa
gaatcagaattactcaagggactacgaggggaactcaagaaggcccaagaaagtcagaag
gaaatgaaactgcttctggacatgtacaagtctgcccccaaggagcagagggacaaggtg
cagctcatggctgcagagcgcaaagccaaggctgaggtagatgaacttcgggggcgaatc
cgggacctggaggagaaggaaaggaaagagagtaagaagttggctgatgaggatgctctg
cgaaggatcaggcttgcagaagaacagattgagcacctgcagcgcaaactaggggccacc
aagcaggaggaggaggcactgctctcagaaatggatgtgactggtcaggcttttgaggat
atgcaggagcagaatggccgccttatacagcagcttcgggaaaaagacgatgctaacttc
aagctaatgtcagagagaatcaagtccaatcagatacataagctgctccgggaagagaag
gatgagcttggggaacaggtcctgggtctcaagtctcaggtggatgctcagctgttggtg
gtacagaagttagaagagaaggagcgggttcttcagggcagcctggggagtgtggagaaa
gaactaaccctaaggagccaagccctggaacttaataaaaggaaggcagtagaagcagca
caactggcagaggacctcaaggtgcagctagaacatgtgcagagccggcttcgggaaatc
caaccctgcctggctgagagccgagcagctcgagagaaggagagcttcaacctcaagagg
gcccaggaggacatttctcgacttcggcggaagctggaaaagcagaagaaggtagaggtc
tatgctgatgctgatgagattctacaggaggaaataaaggagtacaaggcgcggctgacc
tgtccctgctgtaatacccggaagaaagatgccgtcctcaccaagtgctttcacgtcttc
tgctttgagtgtgtgcgaggccgctatgaggcccgccaaagaaaatgcccaaagtgtaat
gctgcttttggggctcatgacttccaccgtgtctatattagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

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