KEGG   Monodelphis domestica (gray short-tailed opossum): 100013757
Entry
100013757         CDS       T01031                                 
Symbol
NUP50
Name
(RefSeq) nucleoporin 50
  KO
K14295  nuclear pore complex protein Nup50
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013  Nucleocytoplasmic transport
mdo05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100013757 (NUP50)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100013757 (NUP50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdo03019]
    100013757 (NUP50)
Messenger RNA biogenesis [BR:mdo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100013757 (NUP50)
SSDB
Motif
Pfam: NUP50 Ran_BP1
Other DBs
NCBI-GeneID: 100013757
NCBI-ProteinID: XP_001363984
Ensembl: ENSMODG00000007116
UniProt: A0A5F8G4P9
Position
8:10415259..10442627
AA seq 473 aa
MAKRNAEKELTDRNWDQEDEVEEVGMFSVASEEVLKNRAIKKAKRRNVAFESESGGAFKG
FKGLVVPPGGPGGGGGLAGFGNGTSIKSLEGLSNGSGLSCAPTLATAKAPSETKVTFGRI
TANGPAAPLVGDKKTSNPKSNGDSQQPSSSGHSVQAKGGCSASAYHKQLAALNCSVRDWI
VKHVDTNPLCDLTPIFKDYERYLTSIEQLPGSSSSNDGNLEKEASRQSPGTQAGPPPQDT
PFLFHPDKAEGVVEKRVDVPSEKKPTPALGVASTASFHFGRKVDSSVLGSLSTAPMANFS
FSSGNVGVFGTDVTQAKPVSSFSPKVLESHPDGSAGEYKGGEEEESEEPPKAIVTEVKEE
DAFYSKKCKLFYKKDNEFKEKGVGTLHLKPAGNQKTQLLVRADTNLGNILLNVLVPPNMP
CSRTGKNNVLIVCVPNPPISEKHAAIPVTMLIRVKTTEDADELHKILLEKKEA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggccaaaaggaacgcagagaaggagctgacagaccggaattgggaccaggaagatgag
gtggaggaggtgggcatgttctcagtggccagtgaagaagtcttgaagaacagagctatc
aagaaggcaaagcgtaggaatgtggccttcgaatctgaaagtggaggggcttttaaagga
ttcaaaggcttggttgtacctccgggaggaccaggaggaggaggaggacttgctggcttt
ggcaatggcaccagcatcaaatctctggaaggcctgtccaatggcagtggcctgtcttgt
gcacctaccctagccactgccaaggccccatcagaaacaaaggtgacctttggccgcatc
acagcaaatggccctgcggctcccttagttggggacaagaagacttccaaccccaagagc
aatggggacagccagcagccctcgtcctctggccacagtgtacaggccaagggtggctgc
agcgccagtgcctatcacaaacagctcgctgccttaaattgctccgtgcgggactggatc
gtgaagcacgtggacaccaacccgctctgtgacctgacacccatctttaaagactatgag
cgctacctgacgagcatcgagcagctgcctggcagcagcagcagtaatgatggcaacctg
gagaaagaagccagcaggcagtccccaggcacccaagctgggccaccaccccaagatacc
ccctttttgtttcatccagacaaagctgagggggtggttgaaaagagggttgatgtgcca
tcagagaagaaaccgaccccggccttaggagtagcatccactgcctccttccactttggc
cgcaaagtcgatagctctgttctgggttccttgagcactgccccgatggcgaatttctct
ttctcttctggaaacgtgggtgtgtttggcacagacgtgacccaggcaaaacctgtctct
tccttctcccccaaagtgctggagagccatccagatgggtctgctggagagtacaaaggt
ggagaagaagaagagagtgaggagccacccaaagcaattgtgactgaagtcaaagaagag
gatgccttttattcaaagaagtgcaaactcttttacaaaaaagataatgagtttaaagag
aagggtgtgggcacgctgcacttgaaaccggctggcaatcagaagacccagcttctggtt
cgagctgacactaatttagggaacatactcctgaatgtcctggttcctcccaacatgccc
tgctcccgaactggcaagaacaacgtgctcattgtctgtgttcccaacccgcccatcagc
gagaagcacgctgccatccccgtgacaatgctcatcagggtcaagaccacagaggacgcc
gacgagctgcacaaaatcctcctagagaagaaggaggcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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