KEGG   Monodelphis domestica (gray short-tailed opossum): 100021202
Entry
100021202         CDS       T01031                                 
Symbol
LTN1
Name
(RefSeq) listerin E3 ubiquitin protein ligase 1
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdo03009]
    100021202 (LTN1)
   04121 Ubiquitin system [BR:mdo04121]
    100021202 (LTN1)
Enzymes [BR:mdo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100021202 (LTN1)
Ribosome biogenesis [BR:mdo03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    100021202 (LTN1)
Ubiquitin system [BR:mdo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100021202 (LTN1)
SSDB
Motif
Pfam: zf-RING_2 FANCL_C zf-ANAPC11 zf-rbx1 RINGv Kinesin_assoc zf-RING-like MFD_D3 zf-RING_16
Other DBs
NCBI-GeneID: 100021202
NCBI-ProteinID: XP_007493198
Ensembl: ENSMODG00000020996
UniProt: F6RK02
Position
4:5953220..6070959
AA seq 1766 aa
MGGKNKQRTKGNVRPSNSGRAAELLAKERGTVPGFIGFGTSQSDLGYVPAVQGAEEIDSL
VDSDFRVVLRKLSKKDVTTKLKAMQEFGTMCDQREAEVVKGVLPYWPRIYCKISLDYDRR
VREATQIAFERLILKVKKHLAPHLKSLMGYWLIAQCDSYAPAATAAKQAFEAAFPPSKQS
EALVFCKDEIINVLQDHLLKETPDTLSDPQTVPEEEREAKYFRILTSSLLALKKLLCMMP
ASEMDSVEEKLKPLLAHSKFWKYGKHHSPQVRSAFFELVSALCQYIPKSMKAESSRVSPA
VLANIDEIDPVVCPSLWEAVLYILTTIEDCWNHVNASKNVFPKLSTMLSEGGRGLATVIY
PYLLPFISKIPHFSTDLNLEFFRDFFTYITQGLSTERILTSHSDCSALISAFFECLRFIM
QQNLGVKEESVKMQKMLINDQLIPFVDTALNDPRLQNEQLYDQLAETLNSWENKAETHGD
DRVVDTLKNVLKTFWANLSDICLQKIASQEADEKSLLGLASLLQVLQKAENSGKQNQKKV
PKARIIDGAPESSTENRKEISSEEENAEELDPSWDQKFPVHISQLRNGPLYDLVCNLAGR
SVAHISGMKSRKHLSFLSSLLNSFASSEVFKVMLELQNEKCNIDVNTVPQELVRSVRENP
AVRFMYEKLINWLSEDKKQNTDFLVDILYSILYCCESNSERKTILDDLTKLDLKWNIILR
IIQKACSGSDKHLLVSTWLKGDILGEKLATLADHLCNKDLEVEDSSESFTSERWTLLSLV
LSQHVKNDYLIGEAYVERIISKLNVALSKAKTTSEAGNTEPSVSFICDVASNFFISVKGC
WLMPSSEELLLTVFQLCAQNQDISHLSDSLVSKLKCTWLCGLHSLVHQFGNANTQSTFLH
SSALWLKNQIQSTSLDVKSLQVMMSTVDDILTSLLEAHNALLLLRLFVENIMPSDSEWEN
MRHSLSTQWLHKPLLEGRLSLNYEYSRTDFKEYTTLQLPSHLCTTALLSKVVLLTLKEEI
ILEQNKTEKIIAELFYSLQWCEELENPYNMLIEFCEMLQGMGITYDNLSVLCNLSGLLEL
IFIRSRDTGTLWSLTISKLMHSKNILPDEVKQLYKTTEGFFPVTEGSLHTVQCLCPFLPL
EDKEELVIQCTARLLTCTKKDLCNIDGSFGYLSILNSCLKTGSIDGREKLYGILKIIMSW
KSDHEDIFLFSCSLKEASPQLLGLNIEIIHLLSILLKYSSSLLVDSDWDFIMCSMLAWLE
TTSENHALYPVPLVQLFACVSCDLACTLSAYFSSISSNLPVNLISEWHDFFSEGIHNLLL
PLLVKITEESKDTSETSFQNSVLIPLGETLTYISKDQLLNHKLSVRLTSDQKTNLPERLQ
TLLNTLAPLLHFRARPVQIAVYHMLYKLMPELPKFDDDDLKSYVDEEEEPALSPPAALMT
VLGILEDLLENILECFPVGECVVIQPLSEEFCYVLGYLLTWKLILTFFKASTSQLRALYS
LYLRRTKSLNKLLYHLFRLMPQVPTYVGPAVEHPNKEMKTFFTEELHLHVRETATLSSQI
PHLACSVYQITLKDLPAMVRLWWNSCEKRVFNVVDKFTSKYVSNMLSFQEISSVQTSTQL
FNGMTVKARSTTREVIATYSVDDIFIELIIQLPLNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq 5301 nt   +upstreamnt  +downstreamnt
atgggtgggaagaacaagcagcggacgaagggaaatgtgaggccctcaaacagtggccgt
gctgcagaactccttgcaaaagaacgtggaacagtacctggatttattggttttgggaca
tctcagagtgacttaggctatgttcctgctgtacaaggagcagaagaaatagatagcctg
gtagattctgatttccgggtggtcctacgaaaactttccaagaaagatgtcacaacaaaa
ttgaaagctatgcaagaatttgggacaatgtgtgatcaaagagaggcagaggttgttaaa
ggtgtgcttccatattggccaagaatttattgcaaaatttctcttgattatgatcgtcgt
gttcgagaagccacgcaaatagcttttgaaagacttatcctaaaagtaaagaaacatttg
gcacctcatttaaaaagtcttatgggatattggctaatagcccaatgtgactcttatgcc
ccagctgcaactgcggcaaaacaagcatttgaagcagctttccctccaagcaagcagtct
gaagcattagtgttttgtaaagatgaaattattaatgtgctacaggatcatcttctaaaa
gaaacaccagatacacttagtgacccacaaactgttccagaagaagaaagagaagccaaa
tattttagaattttaacttcttccctgttggctttaaagaaattgctttgcatgatgcct
gctagtgagatggactctgtagaggagaaacttaaacctcttctagcacacagcaaattt
tggaagtatggaaagcatcattcaccccaggtccgttcagctttttttgagttagtttct
gccctttgccagtatattcctaagtctatgaaagctgaatcatccagagtttctcctgca
gttcttgccaacattgatgaaattgatccagtggtttgtccatctctttgggaagctgtg
ctttatatccttacgactattgaggactgttggaatcatgtaaatgcaagtaaaaatgtg
tttcccaagctatcaactatgcttagtgaaggaggaagaggcctagctacagtcatatat
ccttatctcttgccttttattagcaagatccctcatttttcaacagacttaaacttggaa
ttcttcagagatttttttacttatataactcaaggattatcaacagaacgaatcctaacc
agccattcagactgctcagcattaatatctgcattttttgaatgtttacggtttataatg
caacaaaatttaggtgtaaaagaagaatcagtaaaaatgcagaagatgcttatcaatgat
cagttgatcccttttgttgatacagcgctaaatgacccaagactgcagaatgaacaactc
tatgatcagttagcagaaacactaaattcctgggaaaataaagcagagacccatggagat
gatagagtagtcgataccttgaagaatgtgctgaaaactttctgggcaaatctatcagat
atttgtcttcagaaaattgcttcacaagaagctgatgagaaatcactcttgggtctagct
agcttattacaagttcttcagaaggcagaaaactcagggaaacaaaaccaaaaaaaagtt
cccaaggcccgaattatagatggggcaccagaaagtagcacagagaacagaaaagagatc
tcttcagaagaggagaatgctgaagagcttgatcccagttgggatcagaagtttccagtt
catatctctcaactaaggaatggacctctgtatgacttggtttgtaatcttgccggaagg
agtgttgcacacatcagtggaatgaagtcgaggaagcatttaagctttctttcttctctt
ctgaactcctttgcttcaagtgaagtattcaaagtgatgttggaattacaaaacgaaaaa
tgtaacatcgatgtcaatactgtacctcaagaactagtaagaagtgtccgtgaaaaccct
gcagtacgatttatgtatgaaaaactaataaattggcttagtgaagacaagaagcaaaat
actgattttctggttgatattttatacagcatcctctattgctgtgaaagtaattcagaa
agaaaaactatactggatgatttaacaaagttggatctgaaatggaatattattcttcgg
attatacaaaaggcatgctcaggttctgataaacacttgttagtatctacttggctaaag
ggagatattctaggagagaaattggcaactttggctgatcatttgtgtaataaggacttg
gaagtggaagactcttcagaatcctttacctcagaaagatggacccttttaagtttggta
ttgtctcagcatgttaaaaatgattacttgattggagaagcgtatgttgaaagaattatc
agtaaacttaatgtagctctgtccaaagcaaagactacttcagaagctggaaatactgag
ccgtcagtatctttcatctgtgacgtggcctctaactttttcatctctgtgaaagggtgt
tggttaatgccatcatcggaagagttgttattaaccgtctttcagttgtgtgctcagaac
caggatatttcacacttatcagactctcttgtcagtaaactgaagtgcacttggctatgt
ggcttacattcactagttcatcagtttggaaatgcaaatacacagagcactttcttgcac
tcatctgccctttggctcaagaaccaaattcagtctacatccttggatgtcaaaagtctt
caagtgatgatgtccactgtggatgacatactaactagccttctggaagcacataatgca
cttcttctgctgagactttttgttgaaaatataatgccaagtgatagtgaatgggaaaat
atgaggcattctctttcaacacagtggttgcataaacctcttttggaaggaagattgagt
ttgaactatgagtactctagaacagatttcaaagaatacactacactgcagcttccaagc
catttgtgtactacagcattattaagcaaagtagtcttgttgactctgaaggaggaaata
attcttgaacagaataaaactgaaaaaataattgcagaattgttttattcattgcaatgg
tgtgaagaattagaaaatccatataacatgctaattgaattttgtgagatgcttcaagga
atgggtataacttatgataatttaagtgttctttgcaacttatctggactgcttgagctg
atatttatcagatcccgggacactggaacactttggtctctaactatttctaaattgatg
cattctaagaacattttgcctgatgaagttaaacaactgtataagacaacagaagggttt
tttccagtaacagaaggtagtttgcatactgttcagtgtctctgtccatttttgccttta
gaagataaggaagaactggttatccagtgtacagctaggcttttgacatgcacaaagaaa
gatctttgtaatatcgatggaagttttggatacctttccattttgaattcttgtctgaaa
acaggaagcattgatggtagagagaaactttatggaatactaaaaattataatgtcatgg
aagagtgatcatgaagatatctttctttttagctgcagtttgaaagaagcaagtcctcaa
ctacttggtttgaatatagaaataatccacttactttccatattattgaagtattcttca
tctcttttagtggatagtgactgggacttcatcatgtgttcaatgttggcttggttagag
acgacaagtgaaaatcatgccctgtatcccgtcccacttgtacagctgtttgcctgtgtt
agctgtgatttggcctgcacgctgagtgcttactttagttctataagcagcaatcttcct
gtaaacctaatcagtgaatggcatgactttttttctgaaggcatacacaatttactttta
ccccttttggtgaagattacagaagaaagcaaagatacatcagaaacatcttttcagaat
tcagtgctgatacctttgggcgaaactctaacatacatctcaaaggatcaactgctcaat
cacaaactctccgttagattaacttctgaccaaaagacaaaccttccggaaaggctccag
actttgttaaacacactagccccattacttcacttcagagctagacctgtgcaaattgca
gtttatcatatgttatataagttgatgcctgaattgccaaagtttgatgatgatgatctt
aagtcttatgttgatgaagaagaagaacctgctttgtcaccacctgcagctttgatgact
gtccttggaatcctggaagatttattagaaaacatcttggagtgcttccctgttggagag
tgtgtcgttattcagccattaagtgaggagttctgctacgttttggggtacctcctcacg
tggaaattaatacttacctttttcaaagcatctacgtctcagcttcgagccctttattcg
ttgtatcttagaagaacaaagagtttgaataagctgctctaccatctgttcaggctaatg
ccacaagtacccacctatgtagggccagctgttgagcacccaaataaggagatgaaaacg
ttcttcacagaagagctccatctgcacgttagagagacagcaaccctttcatcacagatt
ccccacttggcttgttctgtctatcaaatcacactaaaagatttgccagccatggttaga
ctttggtggaatagctgtgagaagcgtgttttcaatgtggtagataaatttacaagcaag
tacgtgagcaatatgctttcttttcaagaaatatcttctgtgcaaacaagtacacagcta
tttaatggcatgacggtaaaagctcgctctaccacacgagaagtcatcgctacttactca
gtggacgacatattcatcgaacttattattcagctccctttgaactaccctctgggctcg
ataaccgtggaaagtgggaaaagagttggagtggccgttcagcagtggcgaaactggatg
ctgcagttaagcacgtacctcactcatcagaatggaagtattatggaagggttagccttg
tggaaaaataacgtggacaaacgtttcgaaggtgtcgaagactgcatgatttgtttctca
gtcattcatggtttcaactattctcttcccaagaaagcttgcagaacatgcaagaaaaaa
ttccattcagcctgtttgtacaaatggtttacatctagcaacaaatctacctgtccactg
tgccgggaaacatttttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (73)   

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