KEGG   Monodelphis domestica (gray short-tailed opossum): 100026670
Entry
100026670         CDS       T01031                                 
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100026670 (SMARCA5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdo03021]
    100026670 (SMARCA5)
   03036 Chromosome and associated proteins [BR:mdo03036]
    100026670 (SMARCA5)
Transcription machinery [BR:mdo03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     100026670 (SMARCA5)
Chromosome and associated proteins [BR:mdo03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    100026670 (SMARCA5)
   RSF complex
    100026670 (SMARCA5)
   WICH complex
    100026670 (SMARCA5)
   B-WICH complex
    100026670 (SMARCA5)
   NORC complex
    100026670 (SMARCA5)
   BRF complex
    100026670 (SMARCA5)
   NuRF complex (fruit fly)
    100026670 (SMARCA5)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 Myb_DNA-binding DBINO AAA_14
Other DBs
NCBI-GeneID: 100026670
NCBI-ProteinID: XP_001377204
Ensembl: ENSMODG00000000391
UniProt: F6R7X3
Position
5:complement(135465757..135510740)
AA seq 1050 aa
MSSAAEPPPPPLPPTAETVPPTPAMPATGSGGGNHNKSGVESAPAPAVPPLGDAEMEDVF
DDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKP
GRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRD
YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH
NWMNEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNW
RYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSA
DDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQRE
WYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNS
GKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSI
NAYNEPNSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTV
RVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVF
ASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREK
QKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLF
ELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGF
TNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMA
QIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKL
GFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAE
KKKRGPKPSAQKRKMDGAPDGRGRKKKLKL
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgtcgtccgcggccgagccgccgccacccccgctgccgccgaccgcggagaccgtacct
cccaccccggccatgcccgccaccggcagcggcggcggcaaccacaacaaaagcggcgtg
gagagcgccccggccccagccgtaccccctttgggcgacgcggagatggaggatgtattt
gatgatgcatcaccagggaagcaaaaagaaatacaagaaccagatcctacatatgaagaa
aaaatgcaaactgatcgagcaaacagatttgagtatctgttaaagcagacagagttgttt
gcacatttcattcagcctgctgctcagaagactccgacttcaccattgaagatgaaacca
ggacgtccaagaataaaaaaagacgaaaagcagaatttgctgtcagttggcgattataga
catcgtcgaacagagcaggaggaagatgaagagctgttaacagaaagctccaaggccacc
aatgtgtgcactcggtttgaggactccccatcatatgtaaaatggggtaaactgagagat
tatcaagttcgaggattaaattggttaatatctttgtatgagaatggaatcaatggaatc
cttgcagatgaaatgggtctgggaaagacacttcaaacaatatctcttcttggatatatg
aaacactatagaaatattcctggtcctcatatggtattggttccaaagtctactttgcat
aactggatgaatgaattcaagagatgggtacctacacttagatcagtttgtttgataggt
gataaagaacaaagagctgcctttgtcagagatgtattattaccaggagagtgggatgta
tgtgtaacatcatatgagatgcttattaaagagaaatctgttttcaaaaagtttaattgg
aggtatttagtcattgatgaagctcacagaatcaaaaatgaaaaatccaagttgtcagaa
atagttagagaattcaagactacaaatcgattactgctaacaggaacacctcttcagaac
aacttgcatgaactctgggcacttctcaactttttattgccggatgtttttaactcagct
gatgactttgattcatggtttgatacgaataactgccttggggatcaaaagctagttgaa
cgtcttcatatggttttacgcccattccttcttcgtagaattaaggctgatgttgagaag
agtttacctccaaagaaggaagttaaaatttatgttggtctcagcaaaatgcaaagagaa
tggtatacacggatactaatgaaggacatagacatattaaactctgcagggaaaatggac
aaaatgagactgttgaatattctaatgcaattgaggaaatgttgtaatcatccgtatctc
tttgatggagctgaacctgggccaccttacacaacagatatgcatctggttaccaatagt
ggcaaaatggttgtcctagataaacttcttcccaagttaaaagagcaagattcaagagtt
ctaatcttcagtcagatgacaagagtattagacattttggaagattactgcatgtggaga
aattatgaatattgcaggttggatggacagactcctcatgatgagagacaagattccatc
aatgcatacaacgagccaaacagctccaagtttgtttttatgttaagtacacgtgctggt
ggtcttggaataaatcttgctactgctgatgttgtgatcttatatgattcagactggaat
ccacaagttgatcttcaggctatggatcgagcacacagaattggacaaaccaagactgtt
cgagtatttaggtttatcactgataatacagtggaggaaagaatagtggaacgagcagag
atgaaactcaggttggattcaatagtcattcagcaaggaaggcttgtagatcaaaatctg
aacaaaattgggaaagatgaaatgttacagatgattcggcatggtgcgacacatgtattt
gcctcaaaggagagtgaaattactgatgaagatattgatggtattttggaaagaggtgca
aagaagactgcagaaatgaatgaaaaactctccaaaatgggtgaaagttcactaaggaat
ttcaccatggatacggaatcaagtgtatataactttgaaggtgaagactacagagaaaaa
caaaagatggcattcacagaatggattgaaccacctaagagagaaagaaaagccaactat
gctgttgatgcatatttcagggaagcccttcgagttagtgaacctaaagcacctaaggct
ccccgacctccaaaacaacccaatgttcaggatttccagttcttccctccacgtttattt
gagttattggaaaaagaaattttgtattacagaaaaacaattgggtataaggtacctcgt
aatcctgatctaccaaatgcggcccaggcacaaaaagaagaacagctaaaaatcgatgaa
gcagagcccctcaatgatgaagagcttgaagaaaaagagaagcttctgacccagggattt
accaactggaacaagagagacttcaaccagttcatcaaagctaatgaaaagtggggccgt
gatgatattgagaacatagcaagagaagtagaagggaaaacacctgaagaagtcattgag
tactcagctgtcttctgggaacggtgcaatgaacttcaggacatagagaaaatcatggct
cagattgaaaggggagaagcaagaatacagagaagaattagtatcaaaaaagcacttgat
acaaagattggccgttacaaagcaccttttcaccaactgagaatatcatatggtactaac
aaaggaaagaactacaccgaggaagaggatcgatttctcatttgtatgcttcacaaactt
ggatttgataaggaaaatgtctatgatgaattgcgacagtgtattcgaaactctcctcag
ttcagatttgactggttcctcaagtccaggacagctatggaacttcagaggaggtgtaac
acattaattactttgattgaaagagaaaacatggagttagaagaaaaagaaaaggcagag
aaaaagaaacgaggaccaaagccttcggcacagaagcgtaaaatggatggagcgcctgat
ggtcgaggaagaaaaaagaagctaaagctatga

  All links  
Gene (15)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

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