KEGG   Monodelphis domestica (gray short-tailed opossum): 100029801
Entry
100029801         CDS       T01031                                 
Symbol
TWNK, C1H10orf2
Name
(RefSeq) twinkle mtDNA helicase
  KO
K17680  twinkle protein [EC:5.6.2.3]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    100029801 (TWNK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:mdo03029]
    100029801 (TWNK)
Enzymes [BR:mdo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     100029801 (TWNK)
Mitochondrial biogenesis [BR:mdo03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    100029801 (TWNK)
SSDB
Motif
Pfam: AAA_25 DnaB_C ATPase AAA_22 AAA_29 AAA_16 T2SSE AAA_23 AAA ABC_tran TsaE AAA_33 nSTAND3 cobW AAA_7 PhoH AAA_19
Other DBs
NCBI-GeneID: 100029801
NCBI-ProteinID: XP_007479223
Ensembl: ENSMODG00000011966
UniProt: F7CUW8
Position
1:complement(111421095..111424793)
AA seq 676 aa
MQFFPQSGSFWRVLLTFRWPVIWLGYRGFPWGSFLGPPHRPYRKEVLPAPEAPVVLVTAT
EIRQYLRAQGIPFQDGHSCLRTPSPFLSPVGSEAENWTEGSPHSLFIDKTTGHFLCTGSL
AEGNWEDFQASVEGGAAGSWVSEGKGNEALGNQNEDVLRIWERAVPLAELPEQEEIQMTR
AMFNLAKVSDATLKRFQVRYLRAARSLVFPWFSPGGLSLRGLKLLKAEGKGDGVCYLETT
LPRPSAYHNLFGLPLISRRDVEVVLTGRELDSLALHQATGLPTLALPRGLACLPPTLLPY
LEQFRRIVLWLGDDLRAWEAAKLFARKLNPKRCSLVRPGDQHPRPLEALTQGLNLQKILK
GALPAGHKSIVSFRQLREEVLGELSNVEQVAGVRWGRYPDLNRLLKGHRKGELTVFTGPT
GSGKTTFISEYALDLCTQGVNTLWGSFEISNVRLARIMLTQFVMGRLEEKLEEYDKWADR
FEDLALYFMTFHGQQNIRTVIDTMKHAVYVYDICHVIIDNLQFMMGQEQLSSDRIAVQDY
IVGAFRKFATDNSCHVTLVIHPRKEDGDKELQTASIFGSAKASQEADNVLILQDKKLATG
PGKRYLQVAKNRFDGDVGVFPLEFNKSSLTFSPPAKGKSRLKKVKDENELDPKKPPSSKG
REASGRQKDKAQPPLS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgcagttctttccccaaagtgggtccttctggcgggtcctgctgacctttcggtggcct
gtaatatggctgggatacagaggcttcccctgggggtctttccttggccctccccatcgg
ccctatcggaaggaggttcttccagcccctgaagccccagtggtgcttgtcactgccact
gagataaggcagtaccttcgagcccagggtatccccttccaggatgggcacagctgcctg
cgtacacccagccccttcctgagcccagtgggctctgaggcagagaactggactgagggg
agcccccatagtcttttcatagacaagaccacaggccatttcctctgtactggcagcttg
gccgagggcaactgggaggacttccaggcatctgtggagggtggtgctgctgggtcctgg
gtgagtgagggtaaaggaaatgaagctctaggcaaccagaatgaagacgtactgaggatc
tgggagcgagcagtgccactggccgaactgcctgaacaagaagagattcagatgacccga
gcaatgttcaacctggccaaggtgtctgatgccaccctgaagcgattccaagttcgatat
cttcgagctgccagaagtttggtgtttccatggttctcccctgggggtttgagtctccgg
ggattgaagctgctgaaggcagaaggcaaaggggatggtgtctgctatttggagaccacc
ctgcctcgacccagtgcctaccataacctatttgggctgccattgattagccggagggat
gtagaggtggtgttgacagggcgggagttggatagcctggctttacatcaggccacaggg
ttgcccactctagcattaccccgaggattagcctgtttgcctcctactctactcccttac
ctggaacaattccgacgaattgtgttatggctgggtgatgacttacgggcttgggaagct
gccaaattgtttgcccgaaaactgaaccccaaacgatgctccttggttcggccaggagac
cagcatccccgccctctggaagctctgactcaaggcttaaatttgcaaaaaatactaaaa
ggagctctgcctgctggccacaagtctatagtgtctttccggcaactgagggaagaagtc
ctaggagaactatctaatgtggaacaagtggctggagtgcgctggggacgctaccctgac
ctcaaccgacttttgaaaggccatcgaaagggtgaactaactgtcttcacaggaccaaca
ggcagtgggaagacaacattcatcagtgaatatgcattggacctgtgtacacagggtgtg
aatacactgtggggtagctttgaaatcagcaatgtgcgactggccaggatcatgctgacc
caatttgtcatggggcgtctagaggaaaagctggaagagtatgacaagtgggctgaccgc
tttgaagacttggcactatattttatgacctttcatggacagcagaatatcaggactgtg
atagacacaatgaaacatgctgtttatgtctatgatatctgccatgtgatcattgacaac
ttgcagttcatgatggggcaagagcaactatcttcagacagaattgcagtccaggactac
attgtaggagccttccgaaagtttgccaccgacaatagctgccacgtgaccctggtcatt
cacccccggaaagaagatggtgacaaagaactgcaaacagcatccatttttggttcagcc
aaggccagccaggaagctgacaatgtgttgatccttcaggacaagaagctggcaacaggt
ccaggaaaacgctacctacaggtggctaagaaccgctttgatggagatgtaggtgtcttc
cccctggaattcaataagagctcactgacattttcacccccagccaagggcaagtctcgc
ctcaagaaggtcaaagatgagaatgaactagaccccaaaaagcccccttccagtaaaggg
agagaagcatctggcaggcagaaggacaaagcccagccccctctctcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (17)   
   Pfam (17)   
All databases (51)   

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