KEGG   Monodelphis domestica (gray short-tailed opossum): 100030178
Entry
100030178         CDS       T01031                                 
Symbol
DDX56
Name
(RefSeq) DEAD-box helicase 56
  KO
K14810  ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdo03009]
    100030178 (DDX56)
Enzymes [BR:mdo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100030178 (DDX56)
Ribosome biogenesis [BR:mdo03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    100030178 (DDX56)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 100030178
NCBI-ProteinID: XP_007475931
Ensembl: ENSMODG00000016137
Position
1:complement(502357967..502375045)
AA seq 539 aa
MADSEVLGFQHMGLDQRLLQAIAEQGWARPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPLLQHLLHRKATGPVVEQAIRGLVLVPTKELARQAQTMIRQLTAYCSRDVRVVDVSA
SEDFAFQRWVKEIHLVMKHXGXXWSTHFPVFNSFGFYILHIMEPDSSMLFCSHLPRIYQA
FLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKFLLLYALLK
LSLLRGKSLLFVNTLERGYRLRLFLEQFSIPACVLNGELPLRSRCHIISQFNQGFYDCVI
ATDEEVLGAPFKGKRRGQGSKGERASDTESGVARGIDFHNVTAVLNFDLPPSPEAYIHRA
GRTARANNPGTALTFVLPTERPQLKEIEEALGGESAESMFLPYQFRMEEIEGFRYRCRDA
MRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDRPLHPAVVKPHLGHVP
DYLVPPTLRGIARPHSKRKRNRPFTSLRKLKTPRTQNPLRNFKYTRKKPRTSAPSAKHS
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcggattctgaggtgcttggcttccagcacatgggactggaccaaaggctcttgcag
gccatcgcagagcagggttgggcccgacccacgcttatccaagagaaggcaattccactg
gctttggaggggaaggacctcttggcccgggctcggaccggttcagggaagaccgccgct
tatgccatcccgctcctgcagcatctgcttcataggaaggcgacaggaccagttgtggaa
caggctattcgaggccttgttcttgtacccaccaaggagttggcacgacaggcacagacc
atgatccgtcagctgacagcatattgttcccgggatgttcgtgtggttgatgtgtcagct
tcagaggactttgcttttcaaaggtgggtgaaagaaattcatctagtgatgaagcattaa
gggtaataatggagcactcacttcccagtctttaattcctttggtttttatattttgcat
ataatggaacccgactcttctatgcttttctgcagtcacttgccccggatataccaggcc
ttcctcatgtctgctacttttaatgaagatgtacaggcccttaaggagcttgtgctgcat
aacccggtaacgctgaagttgcaagaatctcagcttccaggaccagatcagctgcagcag
tttcaagttgtttgtgagaccgaggaggacaaattccttttactctatgctctgctaaaa
ctgtctttattgcggggcaaatcactactctttgttaacactttagaacgtggttaccgc
cttcgacttttcctggagcagttcagcattcctgcctgtgtgctcaatggagaactgcct
cttcgttccaggtgccacatcatctcacaattcaaccaaggcttctacgattgtgttatt
gcaactgatgaggaagtgctaggggccccttttaaaggcaagcgtcggggccaaggatcc
aaaggagagagggcctctgatacagaatctggtgtggcacgtggcattgacttccacaat
gtgacagctgtgctcaattttgatctcccaccttcccctgaggcctatattcatcgagct
ggcagaactgcacgtgctaacaacccaggaacagccctgacatttgtactgcccacagaa
cgtccccagctcaaagaaattgaagaggcccttggtggagaaagtgcagaatccatgttt
cttccctaccaatttcgaatggaggagattgagggtttccgataccgttgtcgggatgcc
atgcgttctgtgactaaacaagccattcgggaagcaagactgaaggagattaaagaggag
cttctgcactcagagaagctcaagacctactttgaggacaaccctagagatttacagctc
ttacgacatgatcggcccctgcaccctgcagtagtgaagccccatcttggccatgttcct
gactacttggtcccccctacacttcgtggcattgcccgccctcacagcaagcggaaacgg
aacagacccttcacctccctcaggaaattaaagaccccaaggacacagaaccctctgcga
aacttcaagtataccagaaagaagccaaggacctcagccccttcagctaagcactcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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