KEGG   Monodelphis domestica (gray short-tailed opossum): 100031867
Entry
100031867         CDS       T01031                                 
Symbol
VPS54
Name
(RefSeq) VPS54, GARP complex subunit
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdo01009]
    100031867 (VPS54)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdo04131]
    100031867 (VPS54)
Protein phosphatases and associated proteins [BR:mdo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100031867 (VPS54)
Membrane trafficking [BR:mdo04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    100031867 (VPS54)
SSDB
Motif
Pfam: Vps54 Vps54_N YqzH DCP1 EXOC6_Sec15_N
Other DBs
NCBI-GeneID: 100031867
NCBI-ProteinID: XP_007476814
Ensembl: ENSMODG00000003191
Position
1:628277551..628373215
AA seq 974 aa
MASSHSSSPVPQASSSDVFFKKEVESTKHIRPVQSLPDVCPKEPTGDSHSLCDAPSLVAD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGQDFVDTEVMPSFYLPQISKEHFAIY
QQEISQREKIHERCKTICPPKDTFDRTLLHIHDKSRTDLEQVPKIFLKPDFALEDPLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRLLEDDCQILEEERLVSLIFGLLKQRKLNFLEIYGEEMIITAKNIIKQCVINT
VSKIEEIDTEVVVKLADQMRLMNFPQWFDLLKDIFSKFTVFLQRVKATLNIVRSVVLSVL
DKNQRTRQLEETSEQKNAAKDNSLDTEVAYLTHEGMFISDAFSEGELPPGITDSTSQRNV
SPSSEPCSSDSVSEPECTTDSSSSKEQISSLTPGGVELVVSEDMKLTDLELDKLANSIQE
LLYNASDICHDRSVKFLMARAKDGFLEKLNSSEFVALSRLMETFILDTEQICGRKSMSLR
GALQSQANKFVNRFHEERKTKLSLLLENERWKQADVPAEFQDLVDSITDGKIALPEKKSG
EERKPADFLIVEGQPYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSR
SCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSMLRHF
DHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSTCFRNICKQMAKMHEAIYE
LLPEEQTQMLFLRINASYKIHMKRQLSRLNVVNDGGPQNGLVTADVAFYTGNLQALKGLK
DLDLNMAEIWEQKR
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggcttcaagccacagttcttcaccagtgcctcaagcaagtagcagtgatgttttcttt
aaaaaggaggtagagtctactaaacatattcgacctgtacagtcactgccagatgtgtgt
cccaaggaacccacaggtgattcacatagtttatgtgatgccccatctctagttgcagat
caacatagatggactatttatcattccaaagtaaatcttccagcagcattaaatgatcct
agattagcaaaaagagaatctgatttctttacaaaaacatggggacaagactttgtggac
acagaagtcatgccttcattctacctcccacaaatcagcaaagaacattttgctatatat
caacaggaaatctctcagagagagaagattcatgagagatgcaagactatttgtcctcca
aaagatacctttgataggactctcttacatattcatgataaatccaggacagatctggaa
caagtacctaagatttttttgaaaccagattttgccttggaagatcctttaacatttaat
tcagttttaccatggtctcattttaatactgctgggggaaaaggaaatcgtgatgcagca
tcctcaaagttgcttcaagaaaagctgagccattacctggatattgtggaagtaaacatt
gctcaccagatctctctacgttcagaagcattttttcatgcaatgacctctcagcacgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagtaatgtgtgaaggatctctacacattttaagactggcacttaccaga
aataactgtgtaaaagtatacaataaactgaagttaatggccactgtgcaccagactcag
cctacagtacaagtgttgttatccacttctgaatttgttggagccttggacttaatagca
acaacacaggaggttctacagcaggaacttcagggtattcatagtttccggcacctagga
tcacagctttgtgaattagaaaaactaatagataaaatgatgattgcagaattttctact
tattctcatagtgatttaaatagactactggaagatgactgtcaaattttagaagaggaa
agactagtatcacttatatttggacttttaaaacaaagaaaactaaattttttagaaatt
tatggtgaagaaatgattatcacagcaaagaatatcattaaacagtgtgtgattaataca
gtttcaaagatagaagaaatagacacagaagttgttgtgaaacttgcagatcagatgaga
ttgatgaattttcctcagtggtttgatctcttaaaggatattttctctaagtttacagtc
ttcctccaaagggttaaggcaacactgaatattgttcgaagtgttgtcctctcggttctt
gataaaaatcagaggactaggcaactggaagaaacttcagaacagaagaatgctgcaaaa
gacaattcattagatacagaagtggcctatttaacccatgaaggcatgtttatcagtgat
gcatttagtgagggtgagctaccacctggaataacagattctacctctcaaagaaatgta
tctcccagcagtgagccctgcagcagtgattcggtatccgaaccagaatgtactactgat
tcttcatccagcaaagagcaaatatcttctcttacaccaggaggtgtagagcttgtggtc
agtgaggacatgaagttgactgacttagagctggacaaactggcaaatagcatccaagaa
ttgctgtataatgcttcagatatatgccatgatcggtcggtcaaatttcttatggcaaga
gccaaggatggctttcttgagaagttgaattcctctgagttcgtcgcgctttctcgatta
atggaaacatttattttagatactgaacagatttgtggtcgaaaaagcatgtcactacgt
ggggctcttcagagtcaagctaataaatttgtaaatagatttcatgaagagagaaaaacc
aagctcagcctcctgttagagaatgaacggtggaagcaagctgatgtgcctgcagagttt
caagatcttgttgattccataacagatgggaagattgctttacctgaaaaaaaatctgga
gaagagagaaaacctgctgacttcctgatagttgaaggacagccatatgctgtggttgga
acagtattgctattgataagaattatccttgaatattgccaatgtgtagataacatccca
tctgttactactgacatgcttactcgtctgtcagatttattgaagtatttcaactcaaga
agttgccagttagttcttggagcaggggcgttgcaggttgttggcttgaaaacaataacc
acaaaaaacttagctctttcttcacgctgcctccagttaattgtgcactacattcctgtg
atccgggctcattttgaagctcgcttgcagcctaagcagtatagcatgctcaggcatttt
gatcatatcactaaggattaccatgaccacatagcagaaatctcagcaaaacttgtagcg
atcatggatagcttatttgataagctgttatccaagtatgaggtgaaagctcctgttcct
tctacgtgcttcaggaatatttgtaaacaaatggcaaaaatgcatgaagctatatatgaa
ctccttccagaggaacaaacacagatgttgtttctaagaattaatgcaagctacaaaatc
cacatgaagagacagttatctcgtttaaatgtggtaaatgatggaggacctcaaaatggg
ttggttacagcagatgtagctttttacactggaaatcttcaagccttaaaaggacttaaa
gatttggacctaaatatggctgagatctgggaacagaagaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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