KEGG   Monodelphis domestica (gray short-tailed opossum): 100618379
Entry
100618379         CDS       T01031                                 
Symbol
IGHMBP2
Name
(RefSeq) immunoglobulin mu binding protein 2
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:3.6.4.13 5.6.2.3]
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdo03009]
    100618379 (IGHMBP2)
   03012 Translation factors [BR:mdo03012]
    100618379 (IGHMBP2)
Enzymes [BR:mdo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     100618379 (IGHMBP2)
Ribosome biogenesis [BR:mdo03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   100618379 (IGHMBP2)
Translation factors [BR:mdo03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    100618379 (IGHMBP2)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 ResIII AAA_22 Viral_helicase1 nSTAND3 AAA_16 DEAD SLFN-g3_helicase Helicase_RecD UvrD-helicase IstB_IS21 Flavi_DEAD DnaB_C AAA Zot PhoH AAA_25 ATPase AAA_18 AAA_33 bpMoxR DAP3 AAA_5
Other DBs
NCBI-GeneID: 100618379
NCBI-ProteinID: XP_016278377
Ensembl: ENSMODG00000004040
Position
5:303651545..303670786
AA seq 1016 aa
MAAVESFVSCQLKLLELEREAELQEKRTWQESVAPKELQRRGVCLLKLRVSSQRTGLYGR
LLVVLEPRTGEPGAPLPCNNFGPGDIVGLYEGAAETEQLATGILTRITQRSVTVAFDESP
ESSLALDPSSSYRLLRLANDVTYKRLKKALVTLKQYHSGPAASLIDVLLGTSEPSSPALT
RALGEGEADGDLSLGHSFPRPLTFCNGSLDTSQKEAVGFALAQKELAIIHGPPGTGKTTT
VVEIILQAVQQGLKVLCCAPSNIAVDNLVERLAAQKQRVLRLGHPARLLDAIQHHCLDAV
LARSDQAQIVADIRKDIDQVKSKKTQERRDKNSCRNEMKLLRKELREREEAAMLASLTGA
DVILATNTGASPDGPLKLLPEDYFDVVVIDECAQALEASCWIPLLRARKCILAGDHQQLP
PTIMSKQAATGGLYLSLMERLIKKHGEQVVRMLTVQYRMHQAIMQWASEELYHGRLSAHA
SVASHLLKDLPGVTPTEETSIPLLLIDTAGCGLFELEEEDEQSKGNPGEVQLVSLHVQAL
VAAGVRVGDIAVIAPYNLQVDLLRQQLSPRYPELEIKSVDGFQGREKEAIVLSFVRSNRK
GEVGFLAEDRRINVAVTRARRHVAIICDSRTVSSDAFLKKLVEYFSLKGEARTAFEYLED
IVPDNYSHEGPQGPSQAAGKPGDPARPGPRPRQDRQKARGARKANRSGPPGQMPAGPGVS
DGGQPEGTADPFRTMIVDFLESSKTLLEFPASLNAHDRMLVHQLAEEHGLKHESVGEGKK
RYISVRKKCTAAPPTPTAAAAAPTSVALSPAGMETEGQEELQPGSPGPGMPCHALGEQDT
PSSSENGLSQKGQDWEGGQMGKARPGQPARQRQDTTGSRAPKAPGRKKAKERKGHTGMNG
TTEEDFDALVSAAIRADNTCWLPGCKASVVTLGQLCLHCGQRFCLSHHIPEVHGCGERLE
HHARQRISREGVLYPGSGTKDKAMDPVKRVHLQRRLDKKLGELSSQRRSKKKDKDK
NT seq 3051 nt   +upstreamnt  +downstreamnt
atggcggccgtggagtccttcgtgagctgtcagttgaagctgctggagctagagcgggag
gcggagctgcaggagaagaggacctggcaggagagcgttgccccgaaggagctccagcgc
cgcggtgtctgcctgctgaagctgcgggtctcgagccagcggacgggactctatgggcgg
ctgctcgtcgttctcgaacccagaacaggagagcccggagcccccctgccctgtaacaac
ttcgggcctggtgacatagtgggactatatgaaggtgctgctgagactgagcagctggcc
actggcattctgacccggatcacacagagatccgtgactgtggcctttgatgaatcccca
gagagctcgctggccttggacccaagtagttcttaccgactgctccgactagccaacgat
gtcacttataagcgactcaaaaaagctttagtcaccttaaaacagtatcactctggtcca
gctgcatctcttatagacgttctccttggcacttcagagccaagcagccctgctctgaca
cgtgctctgggggaaggggaggctgatggggacctaagcctgggccactctttccctaga
ccgctaacattctgcaatggctccttggacacgtcacagaaagaagccgttggctttgca
ctggcccagaaagaactggccatcatccatggtccacctggcaccgggaagaccacgacg
gtggtggagatcatactccaggctgtacagcaaggtctgaaggttctgtgctgtgccccc
tccaacattgctgtggacaacttggtggagaggctggctgcacagaagcagagagtcctc
cgtcttggacaccccgcacgccttctggatgccatccagcaccattgcctcgatgcagtc
ttagcccgaagtgaccaggcccaaattgtggcggatatcaggaaggacattgaccaggtg
aaaagcaagaagacccaggagaggagagacaagaatagttgtcgcaatgagatgaagttg
cttaggaaggaattgagggagagggaggaagcagccatgcttgccagcctcacgggggcc
gacgtcatcctggcgacaaacacaggtgcttcccctgatggcccattgaagttgctcccc
gaagattactttgatgtggtggtgattgatgagtgtgcgcaggcccttgaagccagctgt
tggatccccctgctgagggccagaaaatgcatcctggctggagaccaccaacagctgccc
cccaccattatgtctaaacaagctgccacaggggggctctacctgagcttaatggagcgc
ctgatcaagaagcacggcgagcaggtcgtgaggatgctgacggtccagtaccgcatgcac
caggccatcatgcagtgggcatcggaggagctgtaccacggacgcctcagtgcccatgcc
tcagtggccagccaccttctgaaggatctgcccggggtcacccccaccgaggagacgagc
atccccctgctgctcatcgacacggccggctgtggcctgtttgagctcgaggaggaagac
gaacagtccaagggcaacccaggtgaggtccagctcgtcagtctgcacgtgcaggctttg
gtggctgccggagtgcgtgtaggtgacatcgccgtcatcgctccctacaacctgcaggtg
gatctgctccggcagcaactctcccctcgatatccggaactcgaaatcaaatctgtcgat
ggctttcaagggagagagaaggaggcgatcgtcctatcctttgtacggtccaaccggaag
ggtgaggtcggtttcctggccgaggatcgaaggatcaacgtggcagtcactcgcgcccgg
cgccatgttgcaatcatctgcgactcccgcaccgtcagcagcgacgccttcttgaagaag
ctggtggagtatttctctctgaagggcgaagcccgcacggctttcgagtacctcgaagac
attgtccccgacaactactcccacgaaggccctcaggggcccagccaggcagccgggaag
cctggggaccctgctcggcctggcccccggccccgccaggacagacagaaagccagaggg
gcccggaaggccaacagaagcggccccccaggccagatgccagcgggcccaggtgtcagt
gatggtggccaacccgagggcactgcagaccccttcagaaccatgatcgtggactttctg
gagagcagcaagaccctgctcgagttccctgcatccctgaacgcccatgacaggatgctc
gttcatcagctggccgaggagcacgggctgaagcacgagagtgtgggcgaagggaagaag
agatacatctctgtgcgcaaaaagtgcaccgctgccccccctacccccactgctgctgct
gccgcccccaccagtgtggcactctctccagcagggatggagactgaggggcaggaggaa
ctccagccagggagcccaggcccagggatgccatgtcatgccctgggggagcaggacacc
cctagtagcagcgagaacggtctgagtcagaaaggccaggactgggaaggagggcagatg
gggaaagccaggcctggtcagccggccagacaacgccaagatactactggctcccgggca
cctaaagcaccaggaaggaagaaggcaaaagagaggaaaggacacacaggcatgaatggc
acgactgaagaagactttgatgcgctggtctctgccgccatcagagctgataacacctgc
tggcttcccgggtgcaaagccagcgtggtgaccctgggccagctctgcctgcattgtggt
cagcgcttctgcctcagccatcacatccctgaggtccatggatgcggcgaaaggctcgag
caccacgcccggcagaggatcagccgagaaggggtcctgtaccccggcagtggaaccaag
gacaaggccatggaccccgtgaagagagtccatctccagaggaggctggacaagaagctc
ggggagctgagcagccagaggaggagtaaaaagaaggacaaggacaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (29)   
   Pfam (29)   
All databases (89)   

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