KEGG   Mycolicibacterium duvalii: MDUV_32640
Entry
MDUV_32640        CDS       T06492                                 
Name
(GenBank) RNA polymerase sigma factor ShbA
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mdu  Mycolicibacterium duvalii
Brite
KEGG Orthology (KO) [BR:mdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdu03021]
    MDUV_32640
Transcription machinery [BR:mdu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MDUV_32640
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF VMAP-M0 HTH_16
Other DBs
NCBI-ProteinID: BBX18404
UniProt: A0A7I7K496
Position
complement(3410186..3410719)
AA seq 177 aa
MAGSRDALREVLETIRPLVVRYCRARVGSAERSGLSADDVAQEVCLAAITALPRYKDQGR
PFLAFVYGIAAHKVADAHRAASRNKSDPMDVVPERHSGEAGPEQLAIDSESAARMKALLQ
ILPEKQREILILRVVVGMSAEETAEAVGSTPGAVRVAQHRALSRLKSEITTAGHGHA
NT seq 534 nt   +upstreamnt  +downstreamnt
gtggccggcagtcgggacgccctccgggaggtgctggagaccatccgccccctcgtcgtc
cggtactgccgggcgcgggtgggttctgcggaacgcagtggcctctcggcagatgacgtt
gctcaggaggtgtgcttggctgccatcacggcgctgccgcgatacaaggatcagggacga
ccgtttctggccttcgtgtacgggatcgcagcgcataaggttgctgacgcgcaccgggcg
gcttcccggaacaagtccgatccgatggacgtcgtcccggagcgccactccggcgaagcc
ggccccgagcagctggcgatcgactccgaatcggcggcgcggatgaaggcgttgctgcag
atcctgcccgagaagcagcgggagatcctgatcctgcgcgtcgtggtggggatgagcgcc
gaggagaccgccgaggccgtcggcagcacaccgggcgcggtgcgcgttgctcagcaccgc
gcgctttcccggctgaagtccgagatcacgacggcgggacacggccatgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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