KEGG   Mogibacterium diversum: C5Q96_06000
Entry
C5Q96_06000       CDS       T05355                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mdv  Mogibacterium diversum
Pathway
mdv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mdv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C5Q96_06000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdv03400]
    C5Q96_06000
Enzymes [BR:mdv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C5Q96_06000
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C5Q96_06000
DNA repair and recombination proteins [BR:mdv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C5Q96_06000
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Zn-ribbon_8 zinc-ribbons_6 Ribosomal_S13 DZR
Other DBs
NCBI-ProteinID: AVM48421
UniProt: A0A2S0L558
Position
complement(1285616..1286578)
AA seq 320 aa
MSRCMRQTKGCAPTILFALFHSVCIIISLKGVAKMPELVEVETARRILAPQVSGCTIEDA
EVRLAKSIKNYSPEEFKKLVLGSKFDTVLRRGKFLIFNMLTPKHEGAPEELKLVAHYRMT
GVLLVTPPGYEELKHTHIVFKLRDDDGTEKELRYIDQRQFGGIWAITTGAEFRATGIGQL
GAEATDDTLEGEYLKGHLAKRKSAIKTGLLDQSVIAGLGNIYTDEILYRCGIIPTRACNS
LTDDEWQALASEIPKMINFMIEKNQISEEDYLAGKGTDYRNTPFLQVYNHAGEECQKCGS
KLERAVIAGRSSVYCPECQE
NT seq 963 nt   +upstreamnt  +downstreamnt
atgagtcggtgcatgagacagactaaaggctgtgcaccgactattttatttgcattattt
cactcggtgtgtattataattagtttgaagggagtagccaagatgcctgaactagtagag
gttgaaactgcgagaaggattctcgcaccacaagtaagtggctgcacaatcgaagatgcc
gaggtgagactggcaaagagtatcaagaattacagtcccgaagagttcaagaagctggtg
ctcggtagtaagtttgataccgtactgcgccgtggtaaatttctgattttcaacatgctc
acaccgaagcatgaaggtgcgccagaggagctcaaactcgtagctcactaccgcatgact
ggcgttctcttggtgacgccacctgggtatgaggaactcaagcacacgcatattgtgttt
aagctgcgagatgatgacggcaccgagaaagagctccgctatatcgaccagaggcaattt
ggcggtatatgggctataacgacaggtgcagaatttagagcgaccggtatcgggcagctc
ggagcagaggcgacggacgatacacttgaaggagagtatctgaagggtcatctagcgaag
agaaagtctgccatcaagacggggctccttgaccaaagcgttatcgcaggccttggaaat
atttacaccgacgaaatcctataccgctgcggaattattccgactagagcttgtaattcg
cttactgatgatgagtggcaggctctcgccagtgagattccgaagatgataaatttcatg
atagaaaagaatcagatttctgaagaggactatttggcaggaaaagggacggattataga
aatactccatttctgcaggtatataatcatgctggagaggaatgtcaaaagtgcggaagc
aagcttgagagagctgtgattgcaggcaggagcagtgtgtactgccctgagtgtcaggag
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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