KEGG   Candidatus Methanoplasma termitum: Mpt1_c07360
Entry
Mpt1_c07360       CDS       T03540                                 
Symbol
truD
Name
(GenBank) putative tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
mear  Candidatus Methanoplasma termitum
Brite
KEGG Orthology (KO) [BR:mear00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mear03016]
    Mpt1_c07360 (truD)
Enzymes [BR:mear01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Mpt1_c07360 (truD)
Transfer RNA biogenesis [BR:mear03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Mpt1_c07360 (truD)
 Prokaryotic type
    Mpt1_c07360 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AIZ56620
UniProt: A0A0A7LBV7
Position
775553..776863
AA seq 436 aa
MSLGYKECRTAEADVGMSFYLSGADGTGGRLKKEPEDFIVSEIFDKPEVVQNGRFVIAEV
TTRNWETNRLVRLLSKNLGISRERVGFAGTKDKRAVTTQLMSFECPADLMNRIELKDVEI
RNLYTARRGIQIGDLKGNIFSIRVRECNMQKDDIPETIESVSSAIKKVGGFPNYFGVQRF
GVVRPITHKVGEYIIRGDLEGAVRCYVSDPAMFESEDSANVRKMLAEDDNWSEAVKEMPD
SLSFEKILVEHIISSPGDWKGAIEMLPRNLQMMFVHAYQSYLFNKMLSERMRRGIPLDSP
ILGDVIIPLDANRIPQHENPIVTTSSNIDLVSRQIRSKRAFVTISLYGSDSVISDGEMGD
IENSIIKAERISAKDFIVPGLSHCSSKGSRREVLCPVSDLSHRILDEGYEMNFSLPKGNY
ATCLMREFMKSEMEKY
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgagcttgggatacaaggaatgccgcaccgcagaagcggatgtaggcatgtcgttctat
ctcagcggcgccgatggtaccggcggacgtctgaaaaaagaacctgaagattttatcgta
tcagagatattcgataaaccggaagttgttcagaacggcagattcgttatcgccgaagtg
accacaaggaattgggagacaaaccgtcttgtaaggctgctgtccaagaatttaggtatt
tcccgtgaaagagtggggtttgcgggcacaaaggataaaagggccgtcacaacgcagctg
atgtccttcgaatgccctgccgatcttatgaaccggatcgaactcaaagatgtcgagatc
aggaatctgtacacagcgaggagggggatacagatcggcgaccttaaggggaatattttc
agcatcagggtgagagagtgcaacatgcagaaggatgacatcccggagacgatagagtct
gtttcctcagcgataaaaaaggtcgggggattcccgaattacttcggagtacaaaggttc
ggagtggtaagaccgatcacacataaagtgggagaatacatcatcaggggggacctggaa
ggtgcggtcagatgctatgtctccgatcccgcgatgttcgagagcgaagactccgcaaat
gtgagaaaaatgctggcggaggatgacaactggtctgaagccgtgaaagaaatgcccgat
tccctatctttcgagaagatattggtggaacacattatctcttcccccggcgactggaaa
ggagccatcgaaatgcttcccaggaacttgcagatgatgttcgttcacgcttatcagtca
tatcttttcaataaaatgctgagcgaacgcatgagaaggggcatccctctcgactcaccg
atattgggggacgtcatcataccattggatgcgaacaggataccgcagcacgagaatccc
attgtgacgacgtcaagcaacatagatctcgtgtccagacagataaggtcaaaaagagca
ttcgttaccatttccctttacggttcagacagcgtcatctccgacggagagatgggcgat
atcgagaattccataataaaagcggaaagaatatctgcaaaggatttcattgtgccgggc
cttagtcactgcagctcaaagggaagccgcagagaggtcctgtgtcccgtttccgacctg
tcccacaggatcttggacgagggatacgaaatgaatttctccctcccgaaggggaactat
gccacctgcctaatgagagagttcatgaaatccgaaatggaaaaatattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (80)   

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