KEGG   Methanobrevibacter sp. AbM4: Abm4_1479
Entry
Abm4_1479         CDS       T02687                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
meb  Methanobrevibacter sp. AbM4
Pathway
meb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:meb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Abm4_1479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meb03400]
    Abm4_1479
Enzymes [BR:meb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     Abm4_1479
DNA repair and recombination proteins [BR:meb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Abm4_1479
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-GeneID: 15798969
NCBI-ProteinID: AGN17348
UniProt: R9SP23
Position
1724039..1724872
AA seq 277 aa
MDKVIFGPAGKPKGYKGKAYEPCGYLNERRLYAYEYQSGRGLRIGEESSKKLKADSKRNK
VKISMHCPYYINMCAKEDEKIQKSIESLFKCGQVGEWMGAYRLVFHPGYYTKQSPSLALE
KAENGYKRLLKKCEEEGLEDYTFAPETTGKKSQLGNVDEIIHMCENLEHFEPTIDFAHIH
ARGEGILNKKEDYNSIFSKLEDHLNIERLHCHFTTIEYTNKGEKRHHTLEENDKYGPNIE
DLLQNLIDYGWKATIICETPKLDEDAIKMREIYESLL
NT seq 834 nt   +upstreamnt  +downstreamnt
atggataaagtaatatttggacctgcaggaaaacctaaaggatataaaggcaaggcatat
gagccatgcggatatcttaatgagcgaagactatatgcatatgaatatcaatcaggccgt
ggacttagaattggcgaggagagttctaaaaaacttaaagcagactctaaaagaaataaa
gtaaaaatctcaatgcattgtccttattacataaacatgtgtgctaaagaggatgagaaa
atccaaaaatccattgaaagtctatttaaatgcggacaagttggggaatggatgggagca
tatagattagtttttcatccaggatactatacaaaacaaagtcctagtttagctcttgaa
aaggcagaaaatgggtataaaagattacttaaaaaatgcgaagaggaaggacttgaagat
tacacatttgctccagaaacaactggaaagaaatcacagcttggaaatgttgatgagata
atccacatgtgtgaaaatctcgagcatttcgaaccaactatagactttgcacatattcat
gcaagaggtgaaggaatattaaacaaaaaagaggattataattcaatcttctcaaaacta
gaggaccacctcaatattgaaagattacattgtcattttacaacaattgaatatactaat
aagggagaaaaaagacaccacactctagaggagaatgacaaatatggtcctaatattgag
gatttacttcaaaacctaattgactatggatggaaagctacaataatatgtgaaacacca
aaattagatgaagatgcaattaaaatgagagaaatctatgaaagtttactataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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