KEGG   Methylophaga frappieri: Q7C_866
Entry
Q7C_866           CDS       T02056                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
mec  Methylophaga frappieri
Pathway
mec00470  D-Amino acid metabolism
mec00550  Peptidoglycan biosynthesis
mec01100  Metabolic pathways
mec01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:mec00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Q7C_866
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Q7C_866
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Q7C_866
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mec01011]
    Q7C_866
Enzymes [BR:mec01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Q7C_866
Peptidoglycan biosynthesis and degradation proteins [BR:mec01011]
 Precursor biosynthesis
  Amino acid ligase
   Q7C_866
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp ATP-grasp_3 CPSase_L_D2 RimK ATPgrasp_YheCD
Other DBs
NCBI-ProteinID: AFJ02035
UniProt: I1YGJ2
Position
complement(911948..912886)
AA seq 312 aa
MMDQITDPKAFGRVAVLMGGRSAEREISLKSGNAVLSALLAKGVEAVGIDVDSHIDITLR
EGQFDRAFIVLHGRGGEDGEIQGLLQAMAIPFTGSGVTGAMLSMNKRISKLIWQQQALST
PKFRLVNAETDPQELVIALGLPLVIKPVHEGSSIGMSKVTDGEAIAAAIRLALQFDQDVI
AEQWINGAEYTASILAGNALPVIRLKTPREFYDFEAKYHANNTEYLCPCGLTEEQEKRCQ
ALALDAFNALQMKGWGRVDVMADQQGNFYLLEANGVPGMTDHSLVPMAARETGLDFQQLC
WRILETSLEEKN
NT seq 939 nt   +upstreamnt  +downstreamnt
atgatggatcagatcacagatcctaaagcgtttggtcgggttgcggtattgatgggcggc
cgcagcgctgaacgagagatttcactgaaaagtggtaatgcggtgttatccgcattattg
gcaaaaggcgtcgaagcagtcggtattgatgtggacagtcatatcgatatcacgctgcgt
gaaggccagttcgaccgggcttttatcgttttgcatggtcgtggtggcgaggatggcgaa
attcaaggattgctgcaggcaatggcgattccgtttaccggtagtggtgtgacaggggcc
atgctgtccatgaataaacgcatcagcaaacttatctggcagcagcaagcattgtcgaca
cccaaattccggctggtcaatgccgaaactgatccacaagaactggttatcgctctggga
ctgcctttggtcatcaagcccgtgcatgaaggctccagcattggcatgagtaaagtgact
gatggtgaagcgattgcagcggcgattcgcttggcattgcagtttgatcaggatgtgata
gcggagcaatggattaacggcgccgagtataccgccagcattctagcaggcaatgccttg
ccggttattcgactcaagacaccccgtgagttttatgactttgaagctaaatatcatgcc
aacaataccgagtatctctgtccctgcgggctgacagaagaacaggaaaaacgttgtcag
gctttggcattagatgctttcaatgccctgcagatgaaaggctggggacgtgttgatgtg
atggctgatcagcaaggtaatttttatttactggaagccaatggcgtgccggggatgacc
gatcattcgctggtacccatggcggccagagaaaccggactggatttccaacagttgtgt
tggcgcattttggaaaccagtctggaggagaaaaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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