KEGG   Megasphaera stantonii: DKB62_03780
Entry
DKB62_03780       CDS       T05599                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
meg  Megasphaera stantonii
Pathway
meg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:meg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DKB62_03780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:meg03021]
    DKB62_03780
   03400 DNA repair and recombination proteins [BR:meg03400]
    DKB62_03780
Enzymes [BR:meg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DKB62_03780
Transcription machinery [BR:meg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DKB62_03780
DNA repair and recombination proteins [BR:meg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DKB62_03780
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: AXL20756
UniProt: A0A346AY13
Position
complement(796863..797840)
AA seq 325 aa
MIDDNKFKVKTVDRSDDGTYGKFVCEPLDRGYGITLGNSLRRVLLSSLDGVAITSIKIDG
VLHEFSTIPGVREDVSEIILNLKQLSLKFTRDEVDELDITVDITGECEFTAEDLNVSTDI
EVLNPDLHIATLDSDAHIYMQCHIERGKGYVPSTRNKKDTDMIGVIPIDSIFSPIVKTNY
QVNNIRVGNEMDYDSLTLEVTTNGSIAAENAVAKAASIMVSYLDYFQKIASDPKANEAAA
PFTTPDGEEPEEDNGPELSQVKIDVLDLSVRASNCLKRANIYTLGDLVERTEDDLSKIRN
LGKKSVDEIIEKLKDYGFDLKSNEE
NT seq 978 nt   +upstreamnt  +downstreamnt
atgatcgatgataacaaatttaaagttaagaccgttgatagaagcgacgacggcacttat
ggaaaattcgtatgcgaacctctcgacagagggtacggaatcacgttgggcaatagctta
cggcgcgtcctcttgtcttcgctggacggcgtagcaattacctccattaagatcgatgga
gtattgcatgaattttcgacgatacctggcgttcgggaagacgtttcggaaattatcctg
aacttaaaacagcttagtctgaaattcactcgcgacgaagtcgatgaattggatatcacg
gttgatatcactggtgaatgcgaatttactgcagaagatttgaacgtaagcacagacatt
gaagttttaaacccggatcttcatattgcaaccctcgactcggatgcgcacatttatatg
cagtgccatatcgaacggggcaagggctatgttccgtctacaagaaataagaaagatacg
gatatgatcggcgtaattcccatcgattcgatcttctctccgattgtaaagacgaactac
caggttaacaatatccgggtcggcaacgaaatggactacgattcgttgacgcttgaagtg
acgaccaacggcagcatcgctgctgaaaacgccgtggctaaagctgcgtctatcatggtc
agctatttggattacttccaaaagatcgcttctgatccgaaggctaatgaagcagccgct
ccctttacgactcccgacggcgaagaaccggaagaagataacggaccagagctcagccaa
gttaaaattgacgtattggatttgtccgttcgcgcgtcgaactgcttgaaacgggctaat
atctacacgttaggcgatttggttgaacggacggaagatgacttgtctaagattcgcaac
ttgggcaaaaagtctgtagatgaaattattgaaaaactgaaagattatggatttgatttg
aaatccaacgaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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