KEGG   Methylovorus glucosetrophus: Msip34_0892
Entry
Msip34_0892       CDS       T00943                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
mei  Methylovorus glucosetrophus
Brite
KEGG Orthology (KO) [BR:mei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mei03016]
    Msip34_0892
Enzymes [BR:mei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Msip34_0892
Transfer RNA biogenesis [BR:mei03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Msip34_0892
SSDB
Motif
Pfam: RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: ACT50140
UniProt: C6XC65
Position
942878..944737
AA seq 619 aa
MNVFYEEDGGFKVAAIMTENPGSLQVEALTGKRSKIKSANVLMKFEQSLSGFMEAANAEA
EQLDIPFLWECCGEDEFAFDALAQDYYGQKPTPVQSAAVAIRLHSAPVYFYRKGKGHYKA
APADTLNAALAAIEKKRLQAEKIATFAEQLKAGELPKEFRSKLDMLFYDPDKNSMEWKAL
EQAAAETHTGHVQVLAAAGAIASIHDYHLGAFLREYFPKGTGFDAVAALPPVDDLPLAEV
EAFSIDDSTTTEIDDALSVTPLGNGLTRVGIHIAAPALGILPDSPLDAVALHRLSTVYMP
GNKITMLPEEAIEPFSLNAGHERPALSLYLDVAADFSIVHRESRVERVRIVENLRHDALE
PYFNEATLAEDSGHPYWARLLFLFNLAEALEKARGKYDPTRPPQLDYNFYVTDGKVQIVA
RRRGSPMDKLVAELMIEANSQWGLLLKEHAIPGIYRAQNGGKVYMTTQAEPHQGLGVGQY
AWSTSPLRRAVDLINQRQVISVLRAEPPVYPPNSDLLASAMRNFDQTYNAYNEFQTRMER
YWCLQYLVQENIQEIGATVWRENLVRLDNLPYITKVHSLPELAPGTRVKLEIRQVDTLMM
ELDTRFKGVETPVAEVDHV
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaatgtattttacgaagaggatggtggcttcaaggttgccgccatcatgaccgagaat
ccgggctccttgcaggtcgaggccctgaccggcaaacgctccaagatcaagtctgccaat
gtgctcatgaagtttgagcaatccctgtccggtttcatggaagccgccaatgccgaagct
gagcagctggatatcccgtttttatgggaatgctgtggcgaggacgaatttgcctttgat
gcgctggcgcaggattactacggacaaaaacccacgccggtgcaatcagccgcggtggcg
attcgcctgcacagcgcgcctgtgtatttttatcgcaagggcaaaggacactacaaggcc
gcgcctgccgataccctgaatgccgcgctggccgcgattgaaaagaagcgcctgcaagcc
gaaaaaattgccacctttgccgagcaactgaaggccggtgagttgcccaaagagttccgc
agcaagctggacatgctgttttacgatcccgacaaaaactccatggaatggaaagcgctg
gagcaggcggcggccgaaacccataccgggcatgtgcaagtgctggcggctgcgggtgcc
atcgcttccatacacgattaccacctgggcgcttttctgcgcgaatatttccccaaaggc
acgggctttgatgcggtggccgccttgccaccggtcgacgacctgccgctggccgaggtc
gaagctttcagtattgatgacagcaccaccaccgaaatcgatgatgccctatcggtaacg
ccgctgggcaatggtctcacccgcgtcggcattcatattgccgccccggcgctgggtatt
ttgccggactcaccgctggatgcggtcgcgctgcaccgtttgtctacggtctatatgccg
ggcaacaagatcaccatgctgccggaagaggccattgagcctttcagcctgaatgcaggc
catgagcggcctgcgctgtcgctgtatctggatgtggcggccgatttcagcattgtgcat
cgcgagagtcgcgtcgagcgcgtgcgtattgtggaaaacctgcgccatgacgcgctggag
ccttacttcaacgaagctacgctggcggaagatagcgggcatccctactgggcgcgcctg
ctgttcctgttcaacctggctgaggcgctggaaaaagcccgtggcaaatacgacccgacg
cggccgccgcagctcgattacaacttttatgtcaccgacggcaaggtgcagatcgtggcg
cgccgtcgtggttcgcccatggacaagctggtggccgagctgatgatagaagccaacagt
cagtggggtctgctcttgaaagagcatgccattcccggcatttaccgcgcgcagaatggc
ggcaaggtttacatgaccacgcaggcggagccgcatcagggcctgggcgtcggccagtac
gcctggagcacctcgccgctgcgtcgtgccgtagacctgatcaaccagcgccaggtgatc
tcggtattgcgcgctgagccgccggtatatccgccgaatagcgatctgctggcctcggcc
atgcgcaattttgaccagacctacaatgcctataacgaattccagacgcgcatggagcgc
tactggtgcctgcaatatctggtgcaggaaaacatccaggaaatcggcgccacggtgtgg
cgcgagaatctggtgcggctggataacctgccctacatcaccaaggtgcacagcctgccg
gagctggcaccgggtactcgcgtcaagctggaaattcgtcaggtggatacgctcatgatg
gaactggacacccgattcaaaggcgtggagacacccgtagcggaggtggaccatgtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system