KEGG   Methylophaga nitratireducenticrescens: Q7A_2057
Entry
Q7A_2057          CDS       T02055                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mej  Methylophaga nitratireducenticrescens
Pathway
mej03410  Base excision repair
mej03430  Mismatch repair
mej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Q7A_2057 (recJ)
   03430 Mismatch repair
    Q7A_2057 (recJ)
   03440 Homologous recombination
    Q7A_2057 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mej03400]
    Q7A_2057 (recJ)
DNA repair and recombination proteins [BR:mej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Q7A_2057 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Q7A_2057 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Q7A_2057 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH Glyco_transf_4 Beta-lactamase2
Other DBs
NCBI-ProteinID: AFI84871
UniProt: I1XKF2
Position
complement(2111369..2113093)
AA seq 574 aa
MKIQQRNMGDVSELPNDWSACIRRIMAARGIKNASDLTFDLTDLPKPSQMLGMEAAVSLL
IQALQQQWRVMIVADFDSDGATSCAVMMRGLRMMGLQQTDFIVPNRFVHGYGLTTELLSE
IAIDNQPDLLITVDNGIASLDGVALAKQRGMQVLITDHHLAAEQLPQADAIVNPNQPGDN
FPSKMLAGVGVAFYVLLGLRQGLRDSNWFELQQLAEPRLVELLDLVALGTVADVVPLDRL
NRTLVDLGLKRMRQGRACAGISALLQIAGKDISRLSAQDLGFAIAPRLNAAGRMEDMGLG
IDTLLTDNVAMAQQAAQLLDQINLERRSVEQGMQLEALAMLEKLQLNEISQAAAYCLYEE
SWHQGVIGLLASRIKEKLHRPVIVFAPGEPGEIKGSARSITGVHIRDVLVNVAAKYPDLI
LRFGGHAMAAGLTLKQNDFSLFEQAFREAVEHTADPTVFERALYSDGELSTQELNMHLAE
QLPVLAPWGQAFPEPQFHGHFVLQNYRHVGQQSDHLRLTVKLDDGREITAMAFRQTAPKW
LKLGQMVGLHYRLDVNEFRQTKSLQLLVDNLLPS
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgaaaattcaacagcgaaatatgggtgatgttagtgaattacccaatgattggtccgca
tgtattcggagaataatggcagcccgcggtatcaaaaatgccagtgacttaacctttgat
ttgactgatttacccaaaccctcgcaaatgctgggcatggaggccgccgtttccttattg
attcaggcattgcaacagcaatggcgagtgatgattgtggcggattttgatagtgatgga
gcgaccagctgtgccgtgatgatgcgtggtttacgaatgatggggttgcaacagactgat
tttattgtgccgaatcgctttgtccacggttatggtttaaccactgagttattaagcgaa
attgccatagataatcaaccggatttattgattaccgtggataacggcattgccagtctg
gatggcgttgcactcgccaaacaacgtggtatgcaagtgttgatcactgatcatcatctt
gcggcagaacaattgccacaagccgacgccattgttaatcctaatcaaccaggggataac
tttcccagcaaaatgttggccggtgttggggtagcgttttatgtgctgcttggtttacgg
caaggtttacgcgatagtaactggtttgaattacagcaactggcggaaccacggctggtg
gagttgctggacctggtagcactgggaactgtcgcagatgtcgtacctttagacaggcta
aatcgcacattggtggatcttggattgaaacgtatgcggcagggacgcgcctgtgcaggt
atcagcgctttattacaaattgccggtaaggacatcagtcgattatctgctcaggatttg
ggttttgccatagcgccgaggttaaatgccgccggtcgtatggaagatatggggctgggc
attgataccttactgacagataacgttgccatggctcagcaagctgctcagttgctggat
cagattaatcttgagcgtcgctcggttgaacaaggtatgcagctggaagctttggcgatg
ctggaaaaacttcagcttaatgaaatcagccaagcagctgcttattgcttatatgaagaa
agctggcatcaaggggtaatcgggttactcgcctctcgaattaaagaaaaactgcatcgg
ccggtcattgtgtttgcaccgggcgaacctggtgaaattaaaggttcggcacgctccata
acaggcgttcatattcgtgatgtcctggttaatgttgctgctaaatatcctgatttaatt
ttgcgctttggtggacatgcgatggcagcaggcttaacattaaagcagaacgatttttca
ttgtttgagcaggcattcagggaagctgtagaacatacagccgatcccactgtatttgaa
cgcgctttgtattctgatggtgaattatcgacgcaggaactgaacatgcacctggctgag
caattaccggttctggcgccatggggtcaggcttttccggaaccacagtttcatggccat
tttgtgttgcagaattatcgtcatgtcggtcagcaatcggaccatttgcgtttaaccgta
aaactggatgatgggcgtgaaatcacggcgatggcattccgccagactgcaccaaaatgg
ctaaagctcggtcagatggttggtttgcattatcgcttggatgtgaatgagtttcgacaa
accaaatcgctacagttgctggttgataaccttttgcccagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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