KEGG   Methylophaga nitratireducenticrescens: Q7A_245
Entry
Q7A_245           CDS       T02055                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mej  Methylophaga nitratireducenticrescens
Brite
KEGG Orthology (KO) [BR:mej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mej03032]
    Q7A_245
   03400 DNA repair and recombination proteins [BR:mej03400]
    Q7A_245
Enzymes [BR:mej01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Q7A_245
DNA replication proteins [BR:mej03032]
 Prokaryotic type
  DNA Topoisomerases
   Q7A_245
DNA repair and recombination proteins [BR:mej03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Q7A_245
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4
Other DBs
NCBI-ProteinID: AFI83104
UniProt: I1XFD5
Position
complement(256003..258285)
AA seq 760 aa
MGKKLVIVESPAKAKTIKKYLGKDVEVLASYGHVRDLLPKEGAVDPSNDFAMKYQVIDRN
SKHVEAIAKAMKKADTLYLATDPDREGEAISWHLYELLKKKGVLKDKETFRVVFHEITKQ
AVNDAVANPRELSMDLVNAQQARRALDYLVGFTLSPLLWKKVRRGLSAGRVQSPALRMIV
ERELEIEAFKAQEYWTIEADATAEKTPFQAKLTHYKNEKLSQFSIDHTEQADDVVTTLTK
AAEGKLLVTHVEKKQRKRNPAAPFTTSTLQQEASRKLGFGAQRTMSVAQQLYEGVDTGEG
AEGLITYMRTDSVTLAAEAIEEIRIFIGQRYGAKSVPGKPQEYKTKSKNAQEAHEAIRPT
SVLRTPDEMKAYLSVDQHKLYNLIWQRTLASQMIHATLNTVAVDLGCGKGNTFRANGSTV
VNPGFMSVYLEGKDDTKGDKDENILPPMEVGKVVDLVAIRPEQHFTEPPPRYSEASLVRS
LEEHDIGRPSTYASIISTLLQREYVELITKRFHPTDVGRVVGKFLVQHFTRYVDYDFTAK
LEDDLDAVSRGEAEWIPLLRNFWGPFKEQVETKDKEVQRSDVTQELLDEDCPKCGKKLSS
RLGRSGRFIGCTGYPECDYTRNIDGEETTASEPEVVEGRKCPKCESDLWVRTGKYGKFIG
CSSYPKCKHIESLEQPENTGVECPKCNKGEILTRKSRRGKVFYSCSEYPTCDYALWNEPI
KEACPNCQWPILTIKTTKSKGTEKVCPQKDCGFSEKVESA
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgggaaaaaaactcgttattgttgagtcaccggccaaggccaagaccatcaaaaagtat
ctgggcaaagatgtagaagtcttggcatcttatggtcatgtgagagatttactgcccaaa
gaaggagccgtcgatccgtcaaatgattttgcgatgaaatatcaggtgattgatcgcaac
agcaaacatgtcgaggcgattgccaaagccatgaaaaaagctgacacgctctatctggca
acggatccggatcgtgaaggggaggcaatctcctggcatctatatgagttattgaaaaag
aagggagtgttaaaagataaagaaaccttccgtgtcgttttccatgagatcaccaagcag
gcagttaatgatgctgtagccaatccccgcgaactgtcgatggatctggttaacgctcag
caggcacgtcgtgcgctggactatctggtcggcttcaccctttccccattattatggaaa
aaagtgcgtcgtggcttatctgctggccgggtacaaagtcctgctttacggatgattgtt
gagcgtgagctggaaattgaagctttcaaagctcaggaatactggactattgaagcagat
gcaactgctgagaaaactccgttccaggcaaaattaacccattataaaaacgaaaagctc
agtcaattcagcattgaccataccgagcaggccgatgatgttgttacgacattaacaaaa
gcggctgaaggcaaactgctagttacccacgttgagaaaaaacaacgcaagcgtaatcct
gcagcaccttttactacctctaccttgcaacaggaagcctcccgtaagctggggtttggt
gctcagcgcacgatgagtgtggcacaacagttatacgaaggtgtcgatacaggtgagggt
gcagaaggtttaatcacctatatgcgtactgactcggtgacgctggcggcagaagcgatt
gaagaaatccgcatatttatcggtcaacgatatggtgcgaaatcggtaccaggcaaaccg
caggaatacaaaactaaatccaaaaatgcccaggaagcgcatgaggcaatcagaccaact
tcagttctgcgcacccccgatgagatgaaggcttatttatccgtcgatcagcacaaactt
tataacctgatatggcagcgtaccttagccagccagatgattcacgcgactttgaatacg
gttgctgtggatttgggctgtggtaagggcaatactttccgcgccaatggttctaccgtg
gtaaacccggggttcatgagtgtttatctggaaggtaaggacgataccaaaggcgacaaa
gatgaaaatatcctgccaccgatggaagtcgggaaggtcgttgatctggtcgccattcgc
cctgaacagcactttaccgagccaccaccaagatacagtgaggccagtctggtcagaagt
ctggaagaacatgatattggtcgaccatcgacctatgccagcatcatctctacattgtta
cagcgtgaatatgttgagctgattactaaacgttttcaccccaccgatgtgggacgtgtt
gtcggcaagtttctggttcagcattttacccgctatgtggattatgactttacagccaaa
ctggaagatgatctggatgcggtatcgcgtggtgaagccgagtggatcccattgttacgt
aatttctggggaccatttaaagagcaggttgaaaccaaggataaagaagtccagcgtagc
gatgtgacgcaggaactgctggatgaagattgtcctaaatgtggtaaaaaactctccagc
aggttaggacgcagtggccgatttatcggttgtaccggttatccggaatgcgattacacc
cgcaatattgatggtgaagaaaccacagccagcgaaccggaagtggttgaagggcgtaaa
tgcccgaaatgtgaatctgatttgtgggtacgcacgggtaaatacggcaaatttatcggt
tgtagcagttacccgaaatgtaaacacattgaatcactggaacagcccgaaaataccggc
gttgaatgccccaaatgtaataagggtgaaattctgacgcgcaagtcacgccgaggcaaa
gtattttattcctgctcggaatatccgacctgtgactatgcgttatggaacgaaccgatc
aaagaagcctgtccaaattgtcagtggccgatattgaccattaaaacaaccaagagcaaa
ggcaccgaaaaagtctgtccgcagaaggattgtggctttagtgagaaagtggaaagcgct
taa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

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