KEGG   Methylophaga nitratireducenticrescens: Q7A_982
Entry
Q7A_982           CDS       T02055                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mej  Methylophaga nitratireducenticrescens
Brite
KEGG Orthology (KO) [BR:mej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mej03016]
    Q7A_982 (rnd)
Enzymes [BR:mej01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Q7A_982 (rnd)
Transfer RNA biogenesis [BR:mej03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Q7A_982 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: AFI83824
UniProt: I1XHF5
Position
complement(989976..991124)
AA seq 382 aa
MTVLYIDSDTALTQFCSEIQHSKWLAIDTEFLREKTYYPQLCLIQIANDDIIACVDPIAI
KDLTPLLNLLYQPDITLVFHAARQDLELLYLLKNSLPPNLFDTQLAATILGDGDQIGYGN
LVKQRLDVSLDKAHSRADWTQRPLSPEQLEYAADDVRYLCELYHQMSADLEKQQRTEWLK
EDFAALSNADNYVADPETIWRKIRGAGKLKGVQLAVLQQLAAWREQRAMDRDRPRRWILK
DEVMLDLARFAPEKPEKLSQIRGLEARDIERSGRAIIDVISKAKQTPPEQWPILLKPEPL
SNQQEALIDALMALLRKFCDEQSITPIAVASRKDIEKLVRGEKDLALLQGWRYQIVGHHL
TDFISGHLSVTADTQQIHTKEV
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgactgttctttacattgattcggatacggcgttaacacaattttgctcggaaattcaa
cacagcaaatggctggcaattgacacggaattccttcgcgaaaaaacctattacccccag
ttgtgcctgatccagattgccaatgacgatatcattgcctgtgttgatccgatcgctata
aaagatctcactcctttgctgaatttactctatcaaccggacataacactggttttccat
gctgcacgacaggatctggaactgctatatctgttaaaaaattcccttccgccaaatttg
tttgatacccagttagctgcaaccatcctcggtgacggtgatcaaattggctatggcaac
ctggtgaaacaacgtcttgatgtcagccttgataaagcccattccagagccgactggaca
cagcgaccgttaagtcccgaacaattggaatatgcagcagatgatgtacgttatctgtgt
gagctttatcatcaaatgtctgctgatctggaaaaacaacagcgtacggaatggcttaaa
gaagattttgccgccctgtccaatgccgataattacgttgctgatcctgaaaccatctgg
cgtaaaatccgtggggcaggtaaattaaaaggtgtgcaactggccgtattacagcaactg
gcagcatggcgtgaacagcgcgcgatggatcgggatcgtccaaggcgttggattctcaaa
gatgaagtaatgctggatctggcacgatttgccccggaaaaacccgaaaaactcagtcaa
atccgcgggcttgaggcgcgggatattgaacgcagtggtcgggccattattgacgttatc
agcaaagccaaacaaacgccgcccgaacaatggccgatattgctcaaacccgagccactg
agtaatcagcaggaagctctgattgatgcgttgatggcattactacgtaaattctgtgat
gagcaatcaattactcctattgccgtggccagccgtaaagacattgaaaagctggtacgc
ggagaaaaagatcttgctttattacagggctggcgatatcaaatcgtcggtcatcacctg
actgattttatcagtggtcacctgtcagtcactgctgatacacaacagattcatacaaaa
gaggtatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (142)   
   KEGG ORTHOLOGY (1)   
   RefGene (139)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (151)   

Download RDF
DBGET integrated database retrieval system