KEGG   Melaminivora suipulveris: C6568_01340
Entry
C6568_01340       CDS       T05358                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mela  Melaminivora suipulveris
Brite
KEGG Orthology (KO) [BR:mela00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mela03021]
    C6568_01340
Transcription machinery [BR:mela03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C6568_01340
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Stereocilin HTH_28 GerE HTH_23 CSTF_C
Other DBs
NCBI-ProteinID: AVO48052
UniProt: A0A2R3Q8D3
Position
307064..307633
AA seq 189 aa
MATEQELSDFLKSVDKRAFKRALYHVRNEESALDIVQDSMMKLAEHYGDKPVAELPMLFQ
RILTNCTLDWFRRQKTRNAVFTNLGDFEGPDDDGSGFDLLEVHSGVPEGEAVQSAEDIVR
RQQVLHSIETEIQALPARQREAFLMRYWEEMDVAETAAAMGCSEGSVKTHCFRAVQALSR
ALKAKGITL
NT seq 570 nt   +upstreamnt  +downstreamnt
ttggccaccgagcaagagctgtccgatttcctcaagagcgtggacaaacgcgctttcaag
cgtgcgctgtatcacgtgcgcaacgaggagtcggccctggacatcgtgcaggacagcatg
atgaagctggctgaacactacggcgacaagcccgtggccgagctgccgatgctgttccag
cgcatcctcaccaactgcacgctggactggtttcgccggcagaagacgcgcaacgcggtg
ttcaccaacctgggcgatttcgagggcccggacgatgatggatccggcttcgatctgctg
gaagtgcactccggtgtgcccgagggcgaggccgtgcagagcgccgaggacatcgtgcgc
cgccagcaggtgctgcacagcatcgagaccgagatccaggccctgccggcgcgtcaacgc
gaggcttttctgatgcgttactgggaggaaatggacgttgccgaaacggcagcggccatg
ggctgctccgaaggcagcgtcaagacccactgtttccgcgccgtccaagccttgagccgc
gcgctgaaagccaaaggaatcacgctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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