KEGG   Pulveribacter suum: C7H73_07745
Entry
C7H73_07745       CDS       T05362                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
melm  Pulveribacter suum
Pathway
melm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:melm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C7H73_07745 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:melm03021]
    C7H73_07745 (rho)
   03019 Messenger RNA biogenesis [BR:melm03019]
    C7H73_07745 (rho)
Transcription machinery [BR:melm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     C7H73_07745 (rho)
Messenger RNA biogenesis [BR:melm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     C7H73_07745 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_25 Spore_III_AA AAA ResIII AAA_16
Other DBs
NCBI-ProteinID: AVP57562
UniProt: A0A2P1NKL3
Position
complement(1678955..1680217)
AA seq 420 aa
MHLNELKALHVSEVLKQAEALEIENGGRMRKQELMFAIIKKRAKAGEQVFADGVLEILPD
GFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRIPKDGERYFALTKLDTVN
GGAPEQNKHKVMFENLTPLFPREQMKLERDIKGEENITGRIIDIISPIGRGQRALIVAPP
KSGKTVMMQHIAHAITANNPDVHLMVLLVDERPEEVTEMQRSVKGEIIASTFDEPAARHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDAAALQRPKRF
FGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSEVHLSRRLYEKRVFPAIEM
NKSGTRREELLLPPEILQKTRILRQFMYNMDEIESMELMIKKMKETKTNVEFFEAMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcacctcaacgaactcaaggctttgcacgtgtccgaagtgctcaagcaagccgaagcg
ctggagatcgaaaacggcggccggatgcgcaagcaggagctgatgttcgcgatcatcaag
aagcgcgccaaggccggcgagcaggtgttcgccgacggtgtgctcgagatcctgcccgac
ggcttcggcttcctgcgcagccccgacaccagctacaccgccagcaccgacgacatctac
atcagccccagccaggtacgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gtgcgcatccccaaggatggcgagcgctacttcgctctgaccaagctggacaccgtcaac
ggcggcgcgcccgagcagaacaagcacaaggtgatgttcgagaacctgacgccgctgttt
ccgcgcgagcagatgaagctcgagcgcgacatcaagggcgaagagaacatcaccggccgc
atcatcgacatcatctcgcccatcggccgcggccagcgcgcgctgatcgtcgcgcccccg
aagagcggcaagacggtgatgatgcagcacatcgcccacgccatcaccgccaacaacccg
gacgtgcacctgatggtgctgctggtcgatgagcggcccgaggaagtgaccgagatgcag
cgctcggtcaagggcgagatcattgcctccaccttcgacgagccggccgcgcgccacgtg
cacgtggccgagatggtgatcgagcgcgccaaacgcctggtggaattgaaaaaggacgtg
gtgatcctgctggactccatcacccgcctggcccgcgcctacaacaacgtcgtgccctcc
agcggcaaggtgttgtccggaggtgtggacgccgcggcgctgcagcgtcccaagcgcttc
ttcggcgctgcccgcaaggtcgaggaaggcggctcgctgaccatcatcgccaccgcgctg
gtggacaccggcagccgcatggacgaggtgatcttcgaggaattcaagggcaccggcaac
agcgaggtgcacctgagccggcgcctgtatgaaaagcgcgtgttcccggcgatcgagatg
aacaagagcggcacgcgccgcgaagagctgctgctgccgcccgagatcctgcaaaagacc
cgcatcctgcgccagttcatgtacaacatggacgagatcgagtccatggagctgatgatc
aagaagatgaaggagacgaagaccaacgtcgaattcttcgaggccatgcgccgcggcggc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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