KEGG   Methanoculleus bourgensis MAB1: MMAB1_2014
Entry
MMAB1_2014        CDS       T04314                                 
Symbol
fen
Name
(GenBank) Flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mema  Methanoculleus bourgensis MAB1
Pathway
mema03030  DNA replication
mema03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mema00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MMAB1_2014 (fen)
   03410 Base excision repair
    MMAB1_2014 (fen)
   03450 Non-homologous end-joining
    MMAB1_2014 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mema03032]
    MMAB1_2014 (fen)
   03400 DNA repair and recombination proteins [BR:mema03400]
    MMAB1_2014 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mema04147]
    MMAB1_2014 (fen)
DNA replication proteins [BR:mema03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MMAB1_2014 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MMAB1_2014 (fen)
DNA repair and recombination proteins [BR:mema03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MMAB1_2014 (fen)
Exosome [BR:mema04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MMAB1_2014 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc DUF6866_C Surp
Other DBs
NCBI-ProteinID: CVK33227
UniProt: A0A0X3BM84
Position
chrI:1605232..1606233
AA seq 333 aa
MGVAIRDILADCKETLTWGDLPGIAAVDAHNALYQFLSIIRQPDGTPLMNGAGRVTSHLS
GILFRTVNFLEKGIKPVFVFDGKPPEFKQETIEQRREVRNRASEAWKAALKEGDMEEAYK
QASASTRIDRHIIESSHELLDLLGIPVVQAPSEGEAQAAHMVRSGGVTYAVSQDYDSLLF
GSPVLVRNLTVSGRRKARGRTITVNPERFVLSSVLEGLGVTREQLIEIGILVGTDFNPGI
RGVGGKTALKVVRNGEFESLIAEKQPDFDPGPIREFFQNPPVTDDYALEWRTPDVEEVVE
MLCGRYDFSEDRVRNALTKVSVKATQKTLDAWF
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgggcgttgctatccgcgatattctggcagattgtaaagagacattgacatggggcgac
cttcccggcatcgccgcggtggacgcccataacgcgctctaccagtttctctcgatcatc
aggcagcctgacggcaccccgctgatgaacggcgcgggccgggtcacctcgcacctctcc
ggcatcctcttccggacggtcaacttcctggagaaaggcatcaagccggtcttcgtcttt
gacgggaaaccgccggagttcaaacaggagacgatcgagcagcggcgggaggtccgcaac
cgggcgagcgaggcctggaaggcggcactgaaagagggcgatatggaggaggcgtataag
caggcgagcgcgtccacccggattgaccggcatatcatcgagtcgtcccacgaactcctc
gacctgctcggcatcccggtggtgcaggcgccgagcgaaggcgaagcacaggcggctcat
atggtacggagcgggggcgtcacctacgcggtctcgcaggactacgactcgctcctcttc
ggctccccggtgctcgtgcgcaacctcacagtcagcggccggaggaaggcacgcggcagg
acgatcacagtaaaccccgagcgattcgtcctctcttccgtcctcgaaggtctcggtgtc
acacgagagcagctcatcgagatcggcatcctggtggggaccgacttcaaccccgggatc
cggggcgtcggcggcaagacggccttaaaggtcgtgcgtaacggcgagtttgagtccttg
atcgccgagaagcagcctgacttcgatcccgggccgatccgggagttcttccagaacccg
ccggtcaccgacgattacgccctcgagtggaggacgccggacgtcgaagaggttgtggag
atgctctgcgggcgctacgacttctcagaagaccgggtcagaaacgctcttaccaaggtc
tcggtgaaggcgacgcagaagacgcttgatgcctggttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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