KEGG   Manihot esculenta (cassava): 110602447
Entry
110602447         CDS       T05761                                 
Name
(RefSeq) choline transporter protein 1 isoform X1
  KO
K15377  solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mesc02000]
    110602447
   04147 Exosome [BR:mesc04147]
    110602447
Transporters [BR:mesc02000]
 Solute carrier family (SLC)
  SLC44: Choline-like transporter
   110602447
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   110602447
SSDB
Motif
Pfam: Choline_transpo HIG_1_N
Other DBs
NCBI-GeneID: 110602447
NCBI-ProteinID: XP_021595666
Position
15:6616099..6623786
AA seq 697 aa
MRGPWGAVIGRYPSSDGSAQMGGIIRHNRKCRDVAFLVIFIAFWIAMIVNSSFGFNQGNP
LRLTYGLDYRGNVCGDKHANSELRELELVYWLNPNQVYLSGLKNSQFKLANARSICLLDC
PIPSEDALNWVCDYPEGDIRISMEDWIDRNYDYFEFLTPEMRNTSLQLQGPCYPVIFPTV
NVFWRCQYIAHASNISLRHWQQMGGVNINEDIIIDKSIHKSINARSSVLKRYMADVRKAW
PVLIVCGGLLPLFLSVIWLLMIRHFVAAMPWITVVLFDILIITVTMFYYLKAGWIGNDAI
SPIIGEHDPYYHVSGREQNHLRAAAVLMTFAMVVAVLTSIAIIRRILRATSVLKVAAKVI
GEVQALIIFPVVPYAVLAIFYTFWFSAAFHLFSSGQIVQNDCNSNCCAYDLGSKRVNCDR
CCGYSINYTPHIAVAIFFHLFGCYWATQFFIACSATVIAGSVASYYWARGETSPEIPFLP
VFSSMKRLMRYSLGSVALGSLIVSFVESFRFMLDSIRRKLKVAETTPDGCMGKMVHHTSQ
FSLRCVEWTIKSVNRNAYIMIAIMGKSFFNASAIANELIMNNILRIGRVNVIGDIILSLG
KLCVSLSSAVFAFLMLDAHKYRSGHNKISSPLFPVLVCWGLGYIVSTLFFAVVEMSIDTI
ILSFCQDSDEHQGTAQYAPPLLIETLNDQNEMQRLTQ
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgagaggaccttggggggcggtgatagggagatacccctcgagtgatggaagtgctcaa
atgggtggaataattaggcacaataggaaatgcagagatgttgcatttcttgtcattttt
atagcattttggattgcaatgattgttaactctagctttggatttaaccaaggaaacccc
ttaaggcttacttatgggcttgattacagaggaaatgtgtgtggtgataagcatgcaaat
tcagaacttcgcgaattggagcttgtatattggttaaatccaaaccaggtctatcttagt
ggtctgaagaacagccaattcaagttggccaatgctcggagtatatgtttactggattgc
cctattccatctgaagatgctctaaattgggtttgtgattatccggagggagatatccgt
atatcaatggaagattggattgataggaattatgattatttcgagttccttactcctgaa
atgaggaacacatcccttcaactccagggtccttgttaccctgttatatttccaactgta
aatgttttttggaggtgtcagtatattgctcatgcatcaaacatatcattgcggcattgg
cagcaaatgggtggagtaaacatcaatgaggacattataatagacaaatccattcacaaa
tccatcaatgctcggtcatctgtgttgaagagatacatggctgatgttagaaaggcatgg
cctgtgttgattgtctgtggaggactgttgccgctttttttatccgtgatttggctgctg
atgattcggcattttgttgctgcaatgccttggataacagttgttctctttgatattctc
ataataacagtaacaatgttttactacttgaaagctggatggattggaaatgatgccatc
tctcctatcattggtgagcatgatccatattaccatgtatctggacgggaacaaaaccat
ctccgtgctgctgctgttctcatgacttttgcaatggttgttgctgtccttacatcaatt
gccatcattcgccgcattcttagggcaacatctgtcctcaaggtggctgcaaaggtcata
ggagaagttcaagcactcataatttttccagttgtaccatatgctgtccttgcaattttt
tatacgttctggttttcagctgcttttcatctttttagttctggccaaattgtccagaat
gactgcaattccaattgctgtgcctatgatcttgggtcaaaacgggttaactgtgatcgg
tgctgtggctatagcatcaattatactcctcatatagcagttgctatcttcttccacctg
tttggatgttactgggctacacaattttttatagcatgctctgcaactgtgattgctggt
tcagttgcctcctactactgggctcgtggtgagacatcgccagagattccctttcttcca
gttttctcctccatgaagcggcttatgcgatacagccttggttctgttgctctaggctcc
ctgattgtgtcatttgtggaatcatttcgcttcatgcttgattcaatccgtcgcaaactg
aaagttgctgagactacacctgatggctgcatgggaaagatggtgcatcatacttcacag
ttttctctgagatgtgttgagtggacaataaaatctgtgaaccgcaatgcttacataatg
atagctataatgggtaaaagcttctttaacgcatctgcaattgcaaatgaattgataatg
aacaacattcttaggattggaagggtgaatgtgattggagatatcattctaagtctggga
aaattatgtgtcagcctctcgagtgctgtttttgctttcctcatgttggatgcgcacaaa
tatagatctggtcataacaagatatcctccccgctgtttcctgttttggtttgctggggt
ctaggttatatagtttcaactcttttctttgcagtggtggagatgtcaattgatactatc
attctgtcattctgccaggattctgatgagcaccaaggtacagcacagtatgctcctcct
cttcttattgagaccctcaacgatcaaaatgagatgcagagacttacccaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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