KEGG   Manihot esculenta (cassava): 110604668
Entry
110604668         CDS       T05761                                 
Name
(RefSeq) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc00040  Pentose and glucuronate interconversions
mesc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    110604668
Enzymes [BR:mesc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     110604668
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 110604668
NCBI-ProteinID: XP_021598622
Position
17:31548420..31550318
AA seq 406 aa
MSTATLSSLFLFFFFAIVTPHFVFSSPVPDPELVVQEVHRSINASRRNLAFLSCGTGNPI
DDCWRCDPNWERNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDDAVNPKPGTLRYAVI
QDEPLWIVFQRDMVIQLKQELVMNSFKTLDGRGASVHISGGPCITIHYATNIIIHGLHIH
DCKQGGNGNIRDSPHHSGWWTQSDGDGISIFTSKHIWVDHCSLSNCHDGLIDAIHGSTAI
TISNNYFTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFLAPNDRSKKEVTKHEDAPESEWRHWNWRSEGDLMMNG
AFFRQSGAGASSSYARAASLSARPSSLVDSMTRTAGALGCRRGSRC
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgtctactgctactctttcttcccttttcctcttcttcttcttcgccattgtaacccca
catttcgttttctcttccccagttcctgatcctgagctagttgtacaagaggtgcacagg
agcatcaatgcttcaaggaggaaccttgccttcctctcatgtggaaccggcaaccccatt
gacgactgctggcggtgcgaccccaattgggagaggaaccgtcagagattagcagactgt
gctattgggtttgggaaggacgccattggaggaagaaatggtagaatttacgtggtcact
gactctggtgatgatgatgctgtgaacccaaagcctgggactctcaggtatgcagtgatt
caagatgaacccttgtggattgttttccaaagagatatggttattcaactgaagcaagaa
ctggtgatgaattctttcaagactcttgatggtagaggagctagtgttcacatttctgga
ggaccatgcattactattcactatgcaactaatatcatcatccatggattacacatacat
gattgtaagcaaggagggaatggtaatataagagattctcctcatcactcagggtggtgg
actcaatcggacggtgatggtatttccatcttcacaagcaaacatatctgggtcgaccat
tgctcgctctctaattgccatgatggtttgatagatgccatccatggatctacagccatt
actatctctaacaactacttcactcatcatgacaaggtcatgctcttgggtcatagcgac
tcgtatactcaagacaagaacatgcaagttactattgcctttaatcattttggagaagga
ttagtgcagagaatgccaaggtgtaggcatggatattttcatgtggtgaacaatgattat
actcactgggaaatgtatgccattggtgggagtgcttcccctaccattaacagccaaggg
aatagatttcttgcaccaaacgacaggtccaagaaagaggtgaccaaacatgaggatgcg
cctgagagcgagtggagacactggaactggaggtcagagggagacttaatgatgaacgga
gcatttttccggcaatcaggtgcaggagcttcttcaagctatgctagagctgctagcctg
agtgcaagaccatcttctcttgtagattcaatgaccaggactgcgggtgcacttggctgc
aggaggggttctcgttgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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