KEGG   Manihot esculenta (cassava): 110609029
Entry
110609029         CDS       T05761                                 
Name
(RefSeq) WD repeat-containing protein PCN-like
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110609029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mesc03009]
    110609029
Ribosome biogenesis [BR:mesc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    110609029
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PQQ_2
Other DBs
NCBI-GeneID: 110609029
NCBI-ProteinID: XP_043810257
Position
2:complement(14669693..14675716)
AA seq 818 aa
MLEAAYRNSSIQWKPSPVVALATSADDSQVAAAREDGSLEIWLVSPGSVGWHCQLTIHGD
PNSRVSSLVWCRDGSKGLPCGRLFSSSIDGSVSEWDLFHLKQKTVLESIAVSIWQMAVEP
SSNPPSQKDLKPKNVENGYLNNKQNDTDDYPFSESEDDSDSDEPHEQSVVEDPRVAIACD
DGCVRIYTIPDSDELIYNKTLPRVSGRVLSVAWSADASKIYSGSSDGFIRCWDAKVGHEM
YRITVGLGGVGSGPELCVWSLLALRCGTLVSADSAGSVQFWDSQHGTLLQAHSSHKGGVN
ALAAAPSHNRVFSAGSDGQVILYKLSSETVGSSEDVSAKVMKKWVYVGYVRAHTHDVRAL
TVAVPISREDPLPDEKVKRPRSRKRPIDFSYRKWAHLGVPMLISAGDDTKLFAYSAKEFT
KFSPHDICPAPQRVPIQLVLNTVFNRNSLLLVQGSYWLDILCVRVKSGIMPDAGPGPSSG
YANTDLLARIKTKASRKIICSTISNAGTLFAYSDHVKPNLFELKKHSGKTAWAVNKKQLP
QKLPYAHSMIFSSDSSRLMIAGHDRRIYVVDVGSLELVHTFTPQHEECDEELPPTEPPIT
KMFTSGDGQWLAAVNCFGDVYIFNLETQRQHWFISRLDGASVTAGGFPPQNNNVLVVTTS
SNQVYAFDVEAKQLGEWSMRHTFVLPRRYQEFPGEVIGLSFLPLSSPPSVIIYSARAMCL
INFGMPVDREEDNDLINSQHSPFKKLQNTLLNGKLKRRLKDCQTEVKHPKNFEFLAFRDP
VLFIGNLSENSILIMDKPWMDVVKSLDAAPVHRHIYGT
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgctcgaagctgcttacaggaacagctcaatccagtggaagccatctcctgttgtagct
ctagccaccagcgcagatgactcccaggtcgctgctgctcgtgaggatggctcactcgag
atttggcttgtgtctcctggctccgttggctggcactgtcagctgactattcatggagac
cctaattcgagagtttcatcactcgtttggtgtcgagatggctcaaaaggattgccttgt
ggcaggttgttctcgtcaagtattgatggttcagtttcggaatgggatctttttcacttg
aagcagaagactgtcctagagtcaattgctgtctcaatttggcagatggcagtggaacct
tctagtaatccaccaagtcaaaaagatcttaaacccaagaacgttgaaaatggatattta
aataataaacagaatgatactgatgattatccattcagtgaaagtgaagatgattcagac
tctgatgaacctcacgagcaatccgttgttgaggatccacgcgtagcaattgcttgtgat
gatggctgtgtgcggatatacactattcctgactcagatgaattaatatataataaaacg
ttgccaagggtcagtgggcgagttttaagtgtggcgtggagtgctgatgcaagtaagata
tattcagggagtagtgatggatttataaggtgctgggatgctaaagtgggtcatgagatg
tacaggattacagttgggcttggtggcgtgggtagtggacctgaactttgtgtatggtcc
ttacttgctctgagatgtgggacccttgttagtgcagacagtgctggtagtgttcaattt
tgggactctcagcatgggacactgttgcaggcacattcttctcacaaagggggtgtgaat
gctctggcagctgctcctagtcataacagggtgttctccgctggatctgacggtcaggtt
attctttataagctttctagtgagacggttggatctagtgaagatgtgtctgcaaaagtg
atgaagaaatgggtatatgttggttatgtaagagctcacacgcatgatgttagggcattg
acagttgcggtgccaatcagtcgggaagatccgttgcctgatgaaaaggtaaaaagacct
cgtagtagaaagaggcccattgattttagttatcgtaagtgggcccatctgggagttccc
atgctgatctctgctggtgatgacacaaagctgtttgcctattctgccaaggaattcacc
aagttctctcctcatgatatctgccctgcaccacagagagtgcctattcagttagttctt
aatactgtattcaacaggaattctttgcttctagttcaaggatcttattggctagatatt
ctctgtgttcgtgtgaaaagtgggatcatgccagatgctggtcctggcccctctagtggt
tatgcaaatacggatttgctggctcgaattaaaactaaagcatctcggaagatcatatgc
agcaccatttctaatgcgggaacattgtttgcttattcagaccatgttaaacccaatctt
tttgaattgaagaagcatagtggcaaaactgcttgggctgttaataaaaagcaacttcct
cagaaattaccatatgctcattccatgatttttagttctgattcttctaggctgatgatt
gcagggcatgatagaagaatatatgttgtggacgtgggcagcttggaactagtacatact
ttcacccctcagcatgaagaatgtgatgaggaattaccacccactgagccccctataact
aaaatgttcaccagtggtgatggacagtggttagctgctgtcaattgctttggagatgta
tatatttttaatctggagacgcaaaggcagcattggtttatatcaagattggatggtgcc
tctgttacagctggtggttttcctcctcaaaataacaatgttcttgtagtcaccacctct
tcaaaccaggtttatgcatttgacgtggaggcaaaacagttgggagaatggtccatgcgg
catacatttgttctgcccaggagataccaagaatttcccggggaggttatagggctctca
ttcttacctttatcaagtccaccttctgttatcatttacagtgccagggcaatgtgcttg
attaactttgggatgccagtcgatcgcgaggaggacaatgatttgataaacagtcagcat
tctccattcaagaagttacaaaatactcttcttaacgggaaattgaagcggaggttaaaa
gactgtcaaacagaggttaaacatccaaaaaattttgaatttctcgcattcagagatcct
gttttatttattggaaacctttctgaaaattcaatcttgattatggacaaaccatggatg
gatgtggttaagagtttggatgccgctcctgtacacagacatatatatgggacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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