KEGG   Manihot esculenta (cassava): 110610476
Entry
110610476         CDS       T05761                                 
Name
(RefSeq) probable pectate lyase 8
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc00040  Pentose and glucuronate interconversions
mesc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    110610476
Enzymes [BR:mesc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     110610476
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 110610476
NCBI-ProteinID: XP_021606103
Position
3:28053999..28058089
AA seq 448 aa
MAVPSKRVCVFAAVLVVMFVGVLATVQNDGISGVTRKEETEKLQTSKNSSMAASSGEEIE
AWKNEHAVDDPEEVVALVQMGIRNSTQRRRLGYFSCGTGNPIDDCWRCDPNWQKNRKRLA
ECGIGFGRNAIGGRDGRFYVVTDPNDDDPVNPKPGTLRHAVIQDEPLWIVFKRDMVIQLK
QELIMNSFKTIDGRGVNVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYG
WRTMADGDAISIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFTHHNEVILLGH
SDSYTRDKQMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYNAPANPFAKEVTKRVETSTGIWKNWNWRSEGDLLLNGAYFTPSGAGASASYARAS
SLGAKSSSMVGAITANAGALPCRRGRQC
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcggtaccttccaagcgggtttgtgtttttgcggcggtgcttgtggttatgttcgtc
ggagttttagccaccgttcagaacgacgggatctctggtgttaccaggaaagaagaaaca
gagaagttgcagacctccaagaactcatcaatggctgcaagttctggagaagagattgag
gcctggaaaaatgaacacgcagttgatgacccagaagaagtggttgcattggtccaaatg
ggcattcgcaacagtactcaaaggaggcgacttggctatttctcatgtggaactggcaat
cccattgatgattgctggcgctgcgaccccaattggcagaaaaaccgcaagcgccttgct
gaatgtggaattggttttggcagaaacgccattggaggccgcgatggtcgcttctatgta
gttacagatcccaatgatgacgaccctgtcaacccaaagcctggaactttgcgtcacgct
gtaatccaggatgaaccattgtggattgtgttcaaaagggacatggtgattcaattgaag
caggaactcatcatgaacagttttaaaacaattgatggccgtggggttaacgtccatatt
gctaatggagcctgcatcaccatccaatttgttacgaatgtaatcattcacggtctccac
attcatgactgcaagcccactggtaatgctatggttaggagctcacccagtcactacggg
tggaggacaatggccgatggagatgctatctctatttttggatcaagccacatatgggtc
gaccacaattccctttctcattgcgctgatggcctggttgatgctgtcatgggttccaca
gccattaccatctccaacaaccacttcactcatcacaatgaggtgatactgttgggacac
agtgattcctacacaagagacaagcaaatgcaagtgaccatcgcttttaaccattttggg
gaaggacttatccagagaatgccaaggtgtagacacggatacttccacgtagtcaacaac
gactatactcactgggagatgtatgccattggtggaagtgcaaatcccaccattaatagc
cagggcaacagatacaatgcaccagctaatccttttgcaaaggaggtgacaaagagggtg
gaaacaagtacaggcatatggaagaactggaattggaggtcagagggtgaccttctgctg
aatggcgcttatttcactccatctggagctggagcttcagctagctatgctcgtgcttca
agcttaggtgccaagtcttcttccatggttggagcaattactgctaacgcaggtgctctt
ccatgccgcaggggacgccaatgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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