KEGG   Manihot esculenta (cassava): 110611427
Entry
110611427         CDS       T05761                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110611427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110611427
   03016 Transfer RNA biogenesis [BR:mesc03016]
    110611427
   03012 Translation factors [BR:mesc03012]
    110611427
   04131 Membrane trafficking [BR:mesc04131]
    110611427
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    110611427
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     110611427
Transfer RNA biogenesis [BR:mesc03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    110611427
Translation factors [BR:mesc03012]
 Eukaryotic type
  Elongation factors
   110611427
Membrane trafficking [BR:mesc04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    110611427
Exosome [BR:mesc04147]
 Exosomal proteins
  Proteins found in most exosomes
   110611427
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 FlpD SRPRB AAA_22 Semialdhyde_dhC
Other DBs
NCBI-GeneID: 110611427
NCBI-ProteinID: XP_021607451
Position
3:27438092..27440900
AA seq 449 aa
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSQYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPSGAKVTKSAAKKGGK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgggtaaggagaaggttcacatcaacattgtggtcattggccatgtcgactctggaaag
tccaccaccactggccatcttatttacaagcttggaggtattgacaagcgtgtgattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaagctcaaggctgagcgtgaacgtggtatcaccattgatattgccttgtggaagttt
gagaccaccaagtactactgcactgtcattgatgcacctggccatcgtgactttattaag
aacatgattactggtacctcccaggctgactgcgctgttcttatcattgactcaaccact
ggtggttttgaagctggtatttccaaggatggtcaaacccgtgagcatgctctccttgct
ttcacccttggtgtcaaacaaatgatttgctgctgcaacaagatggatgctactacccct
aagtactccaaggccaggtacgacgaaattgtcaaggaggtctcctcatatctcaagaag
gttggctacaaccctgacaagattccttttgtgcccatctctgggttcgagggtgataac
atgattgagaggtccaccaaccttgactggtacaagggcccaactcttcttgaagctttg
gaccagattcaggagcccaagaggccctcagacaagcctctccgactcccacttcaggac
gtctacaagattggtggcattggaactgtcccagtgggtcgtgttgagactggcgtcctg
aagcctggtatggttgtgacttttggacccactggactgacaactgaagtcaagtctgta
gagatgcatcatgaggctctccaggaagccctccctggtgataatgttgggttcaatgtg
aagaacgttgctgtgaaggatctcaagagaggattcgtggcatcaaattctaaggatgat
cctgccaaggaggctgccaacttcacatcacaggtcatcatcatgaaccatcctggtcag
attggaaatggttatgctccagtgctagattgccacacctctcacattgctgtcaagttt
gctgagatcttgaccaagattgatcgccgatctggcaaggagcttgagaaggaaccaaag
tttttgaaaaatggtgatgctggtttcgtgaagatgattccaacaaagcccatggttgtg
gagactttctcccagtatcctccactggggcgttttgctgtgagggacatgcgccagact
gttgctgttggtgtgatcaagagtgtcgataagaaggacccaagtggagccaaggtcacc
aagtctgctgccaagaagggagggaagtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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